Polyodon spathula (Mississippi paddlefish): 121318595
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Entry
121318595 CDS
T07273
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318595
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121318595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
LRR_RPS2
LRR_14
F-box
LRR_At5g56370
LRR_EndoS
LRR_R13L1-DRL21
SAM_Ste50p
Antiterm
Motif
Other DBs
NCBI-GeneID:
121318595
NCBI-ProteinID:
XP_041111373
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Position
7:35988866..35991964
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AA seq
400 aa
AA seq
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METHISCLFPEILAMIFSYLDVRDKGRVAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
LFPSLQARGIRRVQILSLRRSLSYVIQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLR
VLNLSLCKQITDSSLGRIAQYLKSLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCR
HVSDVGIGHLAGMTRSAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLAKLKVLNLSFCGG
ISDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLAYI
AQGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTG
IDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTESEKVR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcacatttcatgcctcttcccggagattctagctatgatcttcagttacttg
gatgtcagggacaaaggcagggttgctcaggtctgtacggcttggagggacgctgcttac
cacaagtcggtctggcgaggggtggaagcgaagttgcatttaaggagggccaacccttcc
ctgttcccgagcctacaggcccgcggaatccggagagtgcagattctcagcctgcggcgc
agcctgagctacgtgatccaggggatgccaaatatcgagagcctaaacctcagtggctgc
tacaacttaaccgacaacggccttggacacgcttttgtacaggaaatcccgtctctgcgc
gtccttaacctcagcctgtgcaagcagatcacggactccagcctcggcaggatcgcccaa
tatctgaagagcttggaagttctggagcttgggggctgtagcaatatcaccaacacgggg
ctgctgctgatagcgtggggcttgcacagactcaagagcctcaacctgcgcagctgcagg
cacgtctccgacgttggcatcggtcacctggctggcatgacccggagcgcggccgagggc
tgcctgaacttggaatacctgacgctgcaggactgccagaagttgacagacctgtcactc
aagcacatctctaaaggcctggccaagctcaaagtgctcaacctgagcttctgtggtggc
atatcggacgcgggcatgatccacctgtcccacatgaccagcctctggagcctcaacttg
aggtcctgcgacaacatcagtgacactggcatcatgcacctggccatgggcacgctcagg
ctatccgggctggacgtctccttctgcgacaagatcggcgaccaaagcttggcgtacatc
gcccagggtttgtaccagctcaaatctttgtctctgtgctcctgtcacatcagtgacgat
gggatcaacaggatggtgcggcagatgcacgaactgagaaccctaaacatcggccagtgt
gttcggatcacagacaaagggcttgagctcattgccgaccatttaacgcagctcactggc
atagacctttatggatgtacaaaaatcactaaaagggggctagagaggataacgcagctc
ccctgccttaaagttttgaacctgggactctggcagatgacagagagcgaaaaagtgagg
tga
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