Polyodon spathula (Mississippi paddlefish): 121318599
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Entry
121318599 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165-like isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318599
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121318599
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121318599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
U-box_ZFPL1
zf-RING_16
zf-RING_Vps41
Prok-RING_4
RINGv
zf-RING_10
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121318599
NCBI-ProteinID:
XP_041111391
LinkDB
All DBs
Position
1:complement(39547781..39578686)
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AA seq
352 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAHFNRHQHSHATSCRHFHLGPQPQMQTEFPHPHPHAGQT
QSGMNPHLPSVHQHATQLHQPLTPLAAPQFQDVPGPPFLPQALHQQYLIQQQLLEAQHRR
ILPHPRRIQDRVPIHPHRLRSGYDYPPNLHVPQPMGQQPRYLAEGTDWDLSVDAGLSHPQ
YQVRQLPQHYQHYLATPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQGLNPTRHASA
VRESYEELLQLEDRLGSVNRGAVQTTIERYTFPHKYKKRKPQELKLSMYEEEESDMDEKC
TICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLSPDS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggttttagtgcatgttggatatctggttcttcctgtttttggctctgtaagaaacaga
ggtgcccattttaacaggcatcagcacagccatgctacctcctgccggcacttccacctg
ggcccccagcctcagatgcagactgagttcccccacccccacccccacgctgggcagacc
cagtccggcatgaacccacacctgccgtctgttcaccagcatgccacacagctccatcag
cccctgacacccttggcagccccgcagttccaagacgtaccaggaccccctttcctacct
caggccttacaccagcaatacctcatccagcagcagctactggaggcccagcataggagg
attcttccacaccccaggaggattcaggatcgagtgcccattcatcctcacaggctgcgt
tctggctacgactaccctcccaacctgcatgttccccagccaatggggcagcagccaagg
tacctggcggaaggcactgattgggacctcagtgtggatgcaggattgtctcaccctcag
tatcaagtcaggcaacttccccaacactatcagcattacttggccactcccagaatgcac
cactttccaagaaatacatcatcagcacaagtggttgttcatgaaatcaggaattatccc
tatccacaactgcacctgctagccctgcaaggactcaaccctacaagacatgcttcagca
gtgagggaaagttatgaggagctgttgcagctagaagacaggctgggaagtgtgaaccgg
ggagcggtccagaccactatcgagagatataccttcccacacaagtataagaagagaaaa
ccgcaagaattgaaattatccatgtatgaagaggaggagtcagacatggatgagaaatgc
acaatctgtctttccatgctggaagatggagaggatgtcagaaggttaccttgtatgcat
ctcttccatcaaggctgtgtggaccaatggctggccaccagtaggaagtgccctatttgc
cgagtggacattgaaacacaactatcgcctgacagctga
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