KEGG   Polyodon spathula (Mississippi paddlefish): 121318628
Entry
121318628         CDS       T07273                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121318628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121318628
Spliceosome [BR:pspa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121318628
 Complex B
    121318628
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 121318628
NCBI-ProteinID: XP_041111446
LinkDB
Position
7:complement(41954730..41987902)
AA seq 922 aa
MADRKLKAFGTKRTLSKKEQDELKKKEEEEKAAEVFEEFLASFDGSDDSTVKTFVRGGIV
NATKEEEAAEIKKNKLYRPATKLTPVQQNNVLSTPSCDSKKPFIKKKTEEKKKSNLELFK
EELKQIQEEREERYKRKKCTSEPGSYGDMEMQPPRRSLFDDDLGDPHTTNLYIGSINPKM
NEEMLCKEFGKFGPLASVKIMWPRTDEERTRVKNRGFVAFMTRKDAERALQALDGKVVMG
FEMKLGWGKAVRIPPHPLYVPPGVLKLTTPPPPSGLPFNAQPRERFRNQDAPKPPITRSK
EEFDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMNKEKSNPDFRFLFEN
KSQEHVYYRWKLFSILQGDPPNEWRTADFRMFRGGSIWRPPLLNPYLHGEEEVKDELTSP
SLQEEELKKGQLKAEHRDKLENLLRGLSPRKEDVGDAMVFCLEKAEAAEEVVGCIAESLS
ILQTPLQKKIARLYLVSDILYNSCAKVTNASYYRKYFEVKLPQMFDDIGEAYKNIQARLQ
AEQFKQKVMACFRAWEDWAIYPEPYLIQLQNIFLGLVKTEEEIVERCMTPDLDGAPLEDV
DGVPLENVDGSPLRGMPWDATSLDGAPVDDIDGVPLTSAIDDIDGMPLNDAVCTKEKSCL
PLAKVALSKWEVIDDSEVMAHASTESKWDLLDNQDSEEDSKNLMEEVKEEVEEESEEDSS
DSEPSTPQKDELPDTKPPQSLFDLSEGKRAKLRELELKVVKFQDELESGKRPRKSGLTVQ
QQVEHYRNKLLQKECEKDEQERREKTSQKSKDRNKKEEKKDKERLEERGKNKEKDRRRSK
ESNHERERNRGRSRDKEREKEDEKMRDRSDRRGGSYSSPAKTKSRSPKKSKRSRSPSPGR
RSWRSSSRSPHRSHKKSKKSKH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggcagatcgcaagctaaaagcctttggtactaaaaggacgttaagtaaaaaggaacaa
gatgaacttaagaaaaaggaggaagaagagaaagctgcagaagtatttgaagaatttttg
gcatcctttgatggtagtgatgacagcactgtgaagacctttgtacgagggggcattgta
aatgcaacaaaagaggaggaagctgcagaaattaagaagaacaaactgtacagaccagcg
acaaaattgactccagtgcagcagaataatgttttatccacaccatcttgtgactcaaag
aaaccttttataaagaagaaaacagaagagaaaaagaaaagtaacctggaactgtttaaa
gaggaactcaaacagatacaggaggaacgtgaggagcgatacaaaagaaaaaaatgtaca
tccgaacctggcagctatggagacatggaaatgcagccgcctcgacggtcattgtttgat
gatgatttaggagacccgcacacaacaaatttgtatatcggaagcatcaatccaaagatg
aatgaagaaatgctttgtaaggagtttggcaagtttgggccattggcaagcgtgaagatt
atgtggccacgtactgacgaggagagaacaagggttaaaaatcgtggatttgtagctttt
atgacccgaaaagacgcagaaagagcactacaggcactggatggcaaggtggtaatgggc
tttgaaatgaagttgggctggggaaaggcagtccgcatccccccacaccctttgtacgtt
cctcccggtgtgctgaaactaactacacccccccctccatctgggttaccctttaatgca
cagcctcgagagaggttcagaaatcaagatgcgccaaaaccaccgataactagatccaag
gaagaatttgacaagactctgtccgaagccgtagtcaaagtggttatcccaacagaaagg
aacttattagggcttatccacagaatgattgaatttgtggtgcgtgaagggcccatgttt
gaagctataatcatgaacaaggaaaagagcaatccagacttcagattcctttttgaaaac
aagagccaggagcatgtgtattaccggtggaagcttttctcaattcttcagggtgaccca
ccgaatgaatggagaacggcagacttccgaatgtttcgtggaggctctatatggcggcct
ccgcttttaaatccttatcttcatggagaggaggaggtgaaagacgagctcacatctcct
tcgctgcaggaggaagagctgaaaaagggccaactaaaggcagaacatagagataagctt
gaaaacctattgcgagggctgagccctcgtaaggaggacgtaggagatgccatggtgttc
tgtttggagaaagctgaggcagcggaggaggtggtggggtgcattgcagaatcactgtcc
atcttgcagaccccgctgcagaaaaagattgcaagactgtatttggtttcagacattttg
tacaactcttgtgccaaagttacaaatgcatcctactatagaaaatactttgaggtaaaa
ctccctcaaatgtttgatgatattggtgaagcatacaaaaatatacaggcaagacttcaa
gcagagcagttcaagcaaaaggtgatggcttgcttcagagcgtgggaggactgggctatc
tatccggagccttatcttattcagttacagaatatttttctggggctagtgaagactgaa
gaggagatagtagaaagatgtatgactcctgatttggatggtgctcctctggaagacgtg
gatggggttcctctggagaacgtagacggctctccgctgcggggaatgccctgggacgca
acctccctggatggagccccagtcgatgacattgacggagttccactcacctccgctata
gacgacatcgatgggatgcctttaaatgatgcagtttgcactaaagagaaaagctgtctt
ccacttgccaaggtagctctgtcgaagtgggaggtgattgacgactccgaggtcatggca
catgcaagtacagaatcaaaatgggacctgcttgataatcaagattcagaagaagattcg
aaaaatctcatggaggaggtgaaagaggaggtggaggaggagtctgaggaggacagcagt
gactctgagccatccactccacagaaggatgagctgcctgacaccaagcccccgcagagc
ctctttgacttgtctgaggggaagcgggccaaactacgagaactcgagttaaaagttgtg
aaatttcaagatgaacttgagtcaggaaaaagacccaggaaatcaggactgacggttcag
cagcaggtggagcactacaggaataaactcttacagaaggagtgtgaaaaagatgagcag
gaaaggagagaaaagacatcccagaagtcaaaagacagaaacaagaaagaagagaagaaa
gacaaagagcgcctagaagaaaggggcaaaaacaaggagaaggacaggaggaggagtaaa
gagtctaatcacgagcgagaaaggaacagggggagaagccgagataaagaacgggagaaa
gaggatgagaagatgagggatcggtcagacagacgaggaggcagctactcgtcacctgca
aaaacaaaatcaaggtcacctaagaagtccaagcggtcccgctccccttctcctggcaga
aggtcgtggagatcaagctcacgatcacctcaccgctcccacaaaaaatccaagaagagt
aagcactga

DBGET integrated database retrieval system