Polyodon spathula (Mississippi paddlefish): 121318635
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Entry
121318635 CDS
T07273
Name
(RefSeq) transcription initiation factor TFIID subunit 9-like isoform X1
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121318635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121318635
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121318635
Coactivators
SAGA/TFTC/STAGA complex
121318635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Bromo_TP
Histone
CENP-T_C
TAF10
TIP49_C
Motif
Other DBs
NCBI-GeneID:
121318635
NCBI-ProteinID:
XP_041111459
LinkDB
All DBs
Position
7:complement(43410280..43435728)
Genome browser
AA seq
253 aa
AA seq
DB search
MAAPKVVPKDAQVMTQILKDMGIAEYEPRVINQMLEFTYRYVTTIIEDAKIYSTHAKKSN
VDADDVRLAIQCRMDQSFTSPPPRDFLLEVARQKNQTPLPLIKPYTGPRLPPDRYCLTAP
NYRLKSLQKKVSSSAGRITVPRLSVGAMSSRPSTPTLGKGTPVSQSVTLTTKVGTPVSLS
GQRFTVQIPSSQSSTVKSAMPSTPTVQNVLINPSLIGSKNILITTNMVSSQSSANESNAL
KRKHEDEDDYDTL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaaggttgtaccgaaagatgctcaggttatgacccagattttgaaggat
atgggtatcgcagagtacgagccaagagtaattaatcagatgctggagtttacctacaga
tatgtaacaacaataatagaggatgcaaagatctactcaacacatgccaagaaatcaaac
gtcgatgccgacgatgtgaggctagctatccagtgccgaatggaccagtcgttcacatca
cctcctccgagagattttctacttgaggttgcaagacagaagaatcagactcctttgcca
ttgattaagccttacactggacccagactccctccagatagatattgcttaacagccccg
aactacagactgaagtccctgcagaagaaggtctcgtcttcagcaggaagaatcactgta
cctagactgagtgttggagcgatgagcagccgtcccagcactcccactctgggtaagggt
acgcctgtatcgcagtcagtcacgctcaccactaaggtaggaacacctgtgtcattgtca
gggcagcgcttcacagtccagatcccttcatcacagtcttcaacagtgaaatcagctatg
ccctccacccctacagttcagaacgtgctcatcaacccctccttgatcggttccaaaaat
attctcatcacaaccaacatggtgtcgtcacaaagctcagccaacgagtcgaatgctttg
aagcggaagcatgaagatgaagatgattacgacactctataa
DBGET
integrated database retrieval system
