Polyodon spathula (Mississippi paddlefish): 121318640
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Entry
121318640 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121318640
04082 Neuroactive ligand signaling
121318640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121318640
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121318640
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121318640
NCBI-ProteinID:
XP_041111469
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Position
7:complement(43736982..43824112)
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AA seq
511 aa
AA seq
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MLGLQEDTLCGFVSALAALCCVCCASQSSSNGNISVVKNTVDKLLEGYDIRLRPDFGSAP
VTVGMSINIASIDAISEVNMDYTITMYFQQSWRDKRLAYTALSLNLTLDNRVADQLWLPD
TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIE
SYGYTTDDIVFFWQGGDSAVTGVDRLELPQFSIMELRLVSKEVVFATGSYPRLSLSFRIK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKI
PYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKLNEKLNKANNERPRYEEKR
LREQESISAQYQTNTIRSYSQRRNLYLEEQRKVGVDPYGNILLTTLEMNNEALPSEVASS
VSDSRNSVMSVDSSGVQFRKQLAARDGFGQATLDRSAARTRANCRLRRRSSKLKLKIPDL
ADVSTIDKWSRIIFPIMFGFFNLVYWLYYVN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcttcaggaagacacactctgtggatttgtttctgctttggcagctttgtgt
tgtgtctgctgtgctagtcaaagctcatccaatgggaacatatctgtggtgaaaaacacg
gtggacaagctgctggagggatatgacatccgcctgcgaccagattttggaagtgctcct
gtaactgtgggaatgagcattaacatcgccagcatcgatgcaatatcggaagttaacatg
gattacacgattacaatgtatttccaacagagctggagagacaagcgtttagcgtacacg
gcactgtccctcaacctcaccctggacaaccgcgtggctgatcagctgtggctcccggac
acctactttctaaacgacaaaaaatccttcctccatggagtgacagtgaagaaccgcatg
atccggctccacccggatggaactgtcctgtatggtctgagaataactacaacagctgcc
tgcatgatggatctgcggagataccctctggatcagcagaactgcacccttgaaatagag
agctatggctacacaacagacgacattgtgttcttctggcaggggggggacagtgctgtg
actggggtggaccggctggagctacctcagttctcaatcatggagctgaggctggtctcc
aaagaagtggtgtttgccacaggttcctatccaaggttgtctcttagtttcaggataaag
aggaatatcggttacttcattctgcagacatatatgccttctatcctcattactatcctg
tcctgggtttccttttggataaactatgatgcctctgctgcgcgagtggccctgggtgtt
accacggtgctcaccatgacaaccatcaacacccacctgcgggagactctcccgaagatc
ccctacgtgaaagccatcgacgtctacctcatgggctgcttcgtgttcgtattcctggcc
ctgcttgaatacgcctttgtcaactacgttttctttggccggggcccccagcagcagaag
aaactaaacgagaagctgaataaggcaaacaacgagcgccctcgctatgaagagaagcgc
ctgagagagcaggaatccatttcagcacagtatcaaaccaacaccatcaggtcatattca
cagcgaaggaatctgtatctcgaagaacaaagaaaagttggggttgacccgtacggaaac
attcttcttactaccctggaaatgaacaatgaggcattgccctccgaagtggccagcagc
gttagtgactccaggaattcggtcatgtccgtggacagctccggggtccagttcaggaaa
cagctggctgctcgggatggatttggacaggccacccttgatcgcagcgctgcccgcact
cgtgccaactgccgtctgcgaagacgctcgtcaaagctgaagttaaaaatccccgacctg
gccgatgtcagcaccattgacaagtggtcgaggatcatatttcctataatgtttggattt
ttcaatttagtctattggttatactatgtgaattga
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