Polyodon spathula (Mississippi paddlefish): 121318641
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Entry
121318641 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121318641
04082 Neuroactive ligand signaling
121318641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121318641
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121318641
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121318641
NCBI-ProteinID:
XP_041111471
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Position
7:43950213..44116297
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AA seq
470 aa
AA seq
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MALGFLSCSSSIPDLWILLMVIAVLSQPGYMRHDVLLPDDGKDNITIFTRILDRLLDGYD
NRLRPGLGESVTEVETDIYVTSFGPVSDTDMEYTIDVFFRQRWRDERLKFDGPMKILPLN
NLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFP
MDTHACPLKFGSYAYTNSEVVYIWTLGHDKSVVVAEDGSRLNQYDLLGHAVSTEVIRSST
GEYIVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT
TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQE
QRKKDSAPLSKKANNTYNIVGTTYAINIAKDPGLPTVSKSTATAAATVAPIQIPQMEESP
PESNKTYNSVSKVDKMSRIIFPVLFAIFNLVYWANYVNREPIIKGSSPSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcactggggttcctgagctgctcttcatccattccggacctgtggattctgctcatg
gtcatcgcagtcctttctcagccaggatatatgagacatgacgttctcctcccagatgac
ggtaaagataatatcacaatctttacccgaatcctcgacagactgctggacggctatgac
aacaggctgaggcctggcctgggagaaagtgtaactgaagtggaaacagatatctacgtt
acgagttttggaccagtttcagacactgacatggaatatacaatcgacgtgttcttccgg
cagagatggagagatgaacgtttgaagtttgacggcccaatgaagatcctccccctcaat
aacctgctggcgagtaagatctggaccccagacacattcttccataacgggaagaaatct
gtagcccacaatatgaccacacccaataaactgctccgcctggtggataacggaacactg
ctctacaccatgaggttaacaatccatgcagagtgtcccatgcacctcgaggacttccca
atggatacacatgcttgtccattaaagtttggaagttatgcatacacaaactcagaagtg
gtttacatttggacccttggccacgataaatctgtggtggtggcagaggatggttctcgc
ttaaaccagtatgacttgctgggccacgctgtcagcactgaagtgatcagatccagcaca
ggagaatacatagtgatgactacgtatttccatttgaaaaggaaaattggctattttgtg
attcagacatacctcccatgcatcatgactgtaattctgtcccaggtatccttctggctc
aacagagagtcagtacctgcgcgcacggtgttcggcgtcactaccgtcctcacaatgacc
accctgagcatcagtgctagaaactctttacccaaagtggcatatgcgacggccatggac
tggttcatagccgtctgttatgcctttgtgttttctgcactgattgaatttgcaacggtg
aactatttcaccaagcggagctgggcttgggacggtaaaaaagctatggaggcccaggag
cagaggaagaaggattcggcaccgctttcaaagaaagccaataacacatacaatattgtt
gggacgacctacgccatcaacatagctaaagatccaggcttacctacggtttcaaagagc
acagccacagcagctgcaacagtggctcccatccaaatcccccaaatggaagaaagtccc
ccggaaagcaacaaaacctacaacagtgtcagcaaagtggacaagatgtcccgcattata
ttccctgtgctttttgccattttcaatttggtttactgggctaactatgtcaacagagag
cccatcattaaggggtcaagccctagtaaatga
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