Polyodon spathula (Mississippi paddlefish): 121318676
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Entry
121318676 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318676
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121318676
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121318676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
121318676
NCBI-ProteinID:
XP_041111534
LinkDB
All DBs
Position
7:complement(46667109..46681513)
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AA seq
725 aa
AA seq
DB search
MENSDSADQGGSEQSEAQRQRQQDRLDREEAFYHFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLGRLQQIKDRPEQQNSGESRNEENRAEDGPEATEDGSNGDSILDWLNSVRQTGNTT
RSGHRGNQSWRAVSQTNPNSGDFRFSLEININRNLAEQQARAEGEQLPREDGEQPEMMEG
ELPMDTTPEPETPAPVREPGPQPEPQQEPEQQPEQQQEPEPQPQPQPEPQPEPQPEPQPE
PQPEPEQEPQPEPQPEPEPEPQPEPEPEPEPEPEPEPEPEPEQEPEPEQELQPEPEPPRP
ETPPEVLLPQLESLEVEEPTRRGQRRARSRSPELRRTRARNERSRSPLNLGGEVLLRRAR
RSTPLQTPPSPVEPQIEGSSRTRQHVLSRQSTVEYDVQMENSPAEADTDSAPVPASAPAE
SVEASRELENPSETASSSEASAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQT
PNNTYTYESERGGFRRTFSHSERAGVRTYVSTIRIPIRRISDAGLSEATSMALQTMIRQI
MTGFGELSYFMDSDSDSDSNRGQNPVLEPPESQTPSNSSNSSVPETPEPQTMEEHRDTTT
EISSPTVAGRESRGARGPISLEEPGSLPFLRLAHFFLLNDDDDDQPRGLTKEQIDNLSTR
NYGENDALKTCSVCIMEYIEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSSN
RESVV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcggacagcgcagatcaaggaggcagcgagcagtctgaagcacagcgccag
agacagcaggatcggctggatcgagaggaggctttctaccactttgtgaacaacctgagc
gaggaagactaccggctcatgagagacaacaacttgctcggcactcctggtgaaattact
gaagaagagttactgggtcgcctacagcaaattaaggatagaccagagcaacagaacagt
ggagaaagcagaaatgaagaaaatagggcagaagatggtcctgaagccacagaagatggt
tctaacggagactccattctagactggttgaactctgtgagacaaactggaaacactaca
agaagtggccacagagggaaccagtcgtggagggcagtgagccaaactaacccaaacagt
ggagactttagattcagcttggaaatcaatatcaaccggaacttagcagagcaacaggcc
agggccgagggggagcagctgccgagggaggatggtgaacagcctgagatgatggagggg
gagctgcccatggacaccactccggagccagagacacctgctcctgttagggagccgggg
ccacagccggagccgcagcaggagccggagcagcagccggagcagcagcaggagccggag
ccgcagccgcagccgcagccggagccgcagccggagccgcagccggagccgcagccggag
ccgcagccggagccggagcaggagccgcagccggagccgcagccggagccggagccggag
ccgcagccggagccggagccggagccggagccggagccggagccggagccggagccggag
ccggagcaggagccggagccggagcaggagctgcagccggagccggagcctcccaggccc
gagactcctccagaagttttacttccacagctcgagagtctcgaagttgaggagcccact
cggaggggacagcgaagagccaggagtcgaagcccagaattgaggagaactagagctcga
aacgagaggagccgctcaccactgaacctcggaggggaggttctgctgcgccgggctcgc
cgcagtacgccattgcaaacgccaccttctccagttgaacctcagattgaaggaagctcc
agaaccagacagcatgtgttatcaaggcagagcactgtggaatacgatgttcagatggag
aattcacctgcagaagcagacacagactctgctcctgttcctgcttctgctccagcagaa
tctgtagaagcctctcgagaactggagaacccctctgagactgcttctagcagcgaggcc
agtgcggctgggaggagaccccccaccatcatgttggaccttcaggtgcggagagtccgt
cctggagagtaccggcagagggacagtatagccagccgcaccaggtcccgctcgcagacc
cccaacaacacctacacgtatgagagtgagcgagggggattccggcgcactttctcccat
tccgagagggcaggtgtgcggacttatgtcagtaccatccggattccgatccgcagaatt
tcggatgcagggcttagtgaggcaacatccatggccctgcagactatgatcaggcagata
atgactggctttggggagctgagctatttcatggatagtgacagtgactcggactccaac
agaggccaaaaccctgtgttggagcccccggagtcacaaacacccagcaacagtagcaac
agctcagtcccggagaccccagagccacaaaccatggaagaacacagggacaccaccact
gaaatcagctcacctactgtggccggaagggagagccgtggagcccggggtcccatcagt
ctagaggagcctgggtcgttgccattcctccgattggcacactttttccttttgaatgac
gacgatgatgaccaacccaggggtctcaccaaagaacaaatcgacaacctctccaccagg
aattatggggagaatgacgcgttaaagacttgcagcgtgtgcataatggaatacatagaa
ggaaacaagctgcgcaagcttccctgctcccatgagtatcatgtccactgcattgaccgc
tggctttcagaaaactcaacgtgtcccatctgccgcagggcagtcttggtctcaagcaac
cgagagagtgtggtctaa
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