Polyodon spathula (Mississippi paddlefish): 121318678
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Entry
121318678 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family B member 7, mitochondrial-like isoform X1
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121318678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121318678
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
121318678
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
AAA_28
AAA_19
AAA_5
DUF87
Motif
Other DBs
NCBI-GeneID:
121318678
NCBI-ProteinID:
XP_041111539
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All DBs
Position
7:complement(46808931..46885575)
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AA seq
759 aa
AA seq
DB search
MLCSFSGRLSKMSPLLVPLQCGYHFQRRKLAVLVQQASCYHLLRHNNDQKSRTYYKRQNT
FQVPQSCIRQAAWQNVGRDNCKQLLDAAKGLQGWQVVDKRTCWHGNAGGRLHSDPKNVLK
EVHAGKILAAMLSYVWPKDRPDLRARVAISLVLLASAKMMNIVVPFMFKYAVDGLNQMSG
NMLNLDDASNTVATMATAVLIGYGVSRACSSLFNELRNAVFGKVAQSSIRRIAKNVFLHL
HNLDLGFHLSRQTGGLSKAIDRGTRGISFVLSALVFNLGPTLFEVVLVSGILYFKCGGQY
ALVTLGTLSAYAAFTVAVTQWRTRFRIEMNKADNEAGNAAIDSLLNYETVKYFNNEKYEA
EKYDGYLKVYEAYSLKTTSTLAMLNFGQNVIFSVGLTGIMLLASQGIMSGNLTVGDLVMV
NGLLFQLSLPLNFLGTVYRETRQALIDMNTLFLLLNTDTKIKDKDLAPPLMITPQDATIK
FEDVYFEYQEGQKVLNGVSFEVPAGKKVALVGGSGSGKSTIVRLLFRFYEPQRGNIYVAG
QNIREASLDSLRKALGVVPQDAVLFHNTIFYNLQYGNINASPEEVHQVAKLAGIHDAILR
MPNGYNTQVGERGLKLSGGEKQRVAIARAILKNPPILLYDEATSSLDSITEENILSSMKE
MVKDRTSIFIAHRLSTIVDADEIIVLNQGKVAERGSHYELLSNPNSLYSDLWNTQNSKIL
SSNGKPDEKSERLTRKEEERKKLQEEILNSVKGCGNCSC
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctccttctccggccgcctttcaaagatgtcgccgctgttagttcccctgcaa
tgtggatatcacttccaaagaagaaaactagccgtgttagtacagcaagccagctgctat
caccttctgaggcacaacaatgaccagaaaagtagaacatattataaaaggcaaaacaca
ttccaggttccacagtcgtgtataaggcaggctgcgtggcaaaatgttgggcgtgacaat
tgtaaacagttgttagatgctgcaaagggcctgcaggggtggcaggtagtagacaagcgg
acatgctggcacgggaacgcgggtgggcgtcttcactcggatccaaaaaatgtgttgaag
gaggtgcatgctggcaagattctagcagcaatgttgtcatatgtttggccaaaggacagg
ccagacctccgtgctcgagttgccatctcactggtgcttcttgcaagtgcaaagatgatg
aatatagtggttcccttcatgtttaaatatgcagtagacggtctcaaccagatgtcggga
aacatgctgaacctggatgacgcttcgaatacagttgcaaccatggcaacggctgttctg
attggctacggagtttcacgtgcttgttcgtctctcttcaatgaactacggaatgccgtg
tttggaaaagtagctcagagctccatcaggagaatagccaagaatgtctttctgcacctt
cacaacctggatttgggattccacctcagccggcagacgggaggactctccaaagccatt
gatcggggcaccagaggcatcagcttcgtgctgagtgctttagtcttcaacttggggccc
actctgtttgaagttgtactcgtcagtgggattttatattttaaatgtgggggccagtat
gcattagtcaccctgggcacactgtcagcttatgcagcgttcacagtggcagttacgcag
tggagaactcggttcagaatagaaatgaacaaagctgataatgaggcaggaaatgctgcc
attgactcgctactcaattatgagactgtgaagtattttaacaatgagaaatatgaagcc
gagaaatatgatgggtatctgaaagtctatgaagcgtactcattgaagaccacctcgacg
ctcgcaatgctgaacttcgggcagaatgttatcttcagcgtcggcctcactggtatcatg
ttgcttgcgagccaggggatcatgtcagggaacctgacggtgggagacttggtgatggtc
aatgggctgctgttccagctgtctctccctctgaacttcctgggcactgtttacagagag
accaggcaggccctcattgacatgaacaccttgttcctgctactcaacactgacaccaaa
attaaggataaggacctggcccctcctttgatgataactccccaggacgccaccatcaag
tttgaagacgtgtattttgagtatcaggaaggccagaaagtcctgaacggcgtgtcgttt
gaagtgccagcggggaagaaggtggcccttgtaggcggcagtgggtcagggaagagcaca
atagtaagattgctgttccgtttttatgaaccccagagaggaaacatctacgttgctggt
cagaatatcagagaagccagtttggacagcctaaggaaagcgcttggggttgtaccacag
gatgctgttttattccacaacacaatcttctataaccttcagtatgggaacatcaatgca
tcgcctgaggaagtgcatcaggtggcaaaactagcaggaatccacgatgccatcctgcga
atgcccaatggttacaatacacaagtcggggagagaggactgaaactgtcaggaggagaa
aagcaaagagtagccattgccagagctatcctgaaaaacccccctatcctcttgtatgat
gaagccacttcgtctctggactccatcactgaagagaatatactaagttctatgaaagag
atggtaaaagaccgcacgtccatcttcatcgctcacaggctgtctactattgtagacgca
gatgaaattattgtcctgaatcagggtaaagtagcagagcggggctctcactacgaactc
ctgagcaacccaaacagcctgtactcagatctgtggaacacgcagaacagcaagatcctg
agcagcaatggcaagccggatgagaagagcgagaggctgaccaggaaagaggaggagagg
aagaaactgcaggaggagatcctcaacagtgtgaagggctgcgggaactgctcctgctaa
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