Polyodon spathula (Mississippi paddlefish): 121318701
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Entry
121318701 CDS
T07273
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121318701
04020 Calcium signaling pathway
121318701
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121318701
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121318701
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
121318701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
ig
LRR_8
Ig_2
C2-set_2
C2-set_3
Haspin_kinase
V-set
LRR_5
LRR_NXF1-5
LRR_4
Motif
Other DBs
NCBI-GeneID:
121318701
NCBI-ProteinID:
XP_041111592
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All DBs
Position
1:complement(40174911..40260379)
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AA seq
808 aa
AA seq
DB search
MIAFWRWRGAAVMTLWVFCWLLLGLWRLTDACPSSCTCSSSRISCIEQDQGIVAFPVLSS
AIEMENITEIYIANQSQLRAINDIDVETYLGLRNLTVTNSGLSYVSRRSFQKTPNLQYVN
LKNNKLSTLSWKTFRNLNLAYLVLAGNPFQCSCDIQWIKLWQENEMASLETQNLMCKDDS
NRKFLLHEMHIPDCVMPTSSISPSSVTLMEGSDITLECRTSGIPSPDVSWYLGNLVTSYQ
QQYNLKQHYTTLKMINVSSNDTGKTVLCIAENIVGENESSVILVVHFPPKITFLDQAVLD
HHWCIPFSVRGNPKPKLIWFYEGSVLNETDFIWTSIHIAYDSEHHGCLQLDSPTHLNNGQ
YTLLAKNDYGTDERTVSAHFMQDPCIDCTEPPYYDYTSDPAPTNVPDVEPDSVAVYVVVG
IAAMAFTGFVLMLIVLKFGRNSKFGIKGTSSVISNDDDSASPLHHVSNGSNTPSSSEMGS
DAVIIGMTKIPVIENPQYFRSTNSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECY
NLCPDQDKILVAVKALKEASENARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE
YMMHGDLNKFLRAHGPDAVLMADGQNNHPAELTPSQMLHIAQQIAAGMMYLASQHFVHRD
LATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVSVGGHTMLPIRWMPPESIMYRKFTTES
DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRNSPKEVYDLMLGCWQREP
HMRLNIKEIHSLLQNLAKASPVYLDILG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcattttggaggtggcgtggagccgctgtgatgactctttgggtattttgttgg
cttttgctggggctttggaggctcaccgacgcttgtccttcttcttgtacgtgcagcagc
agcaggatctcatgtatcgagcaggatcaagggatcgtggctttcccagtattaagttct
gctatagaaatggaaaatattactgaaatatacattgcaaatcaaagccagttacgcgcc
atcaatgacattgacgtggagacgtacttgggcctgagaaatttaactgtgacaaattct
ggactgtcttacgtgtcccgtcggtcatttcagaagactcccaatcttcaatatgtcaac
ctaaaaaacaataaattatcaacgttatcttggaagaccttcaggaatttaaacttggca
tatctggtacttgcaggaaatccattccagtgctcttgtgatattcagtggatcaaactg
tggcaagagaatgaaatggccagtctggaaactcagaatctgatgtgcaaagatgacagc
aataggaagttcttactacatgaaatgcacattccggattgtgtgatgcctacatctagt
ataagcccttctagtgttaccttaatggaaggaagcgacatcacacttgaatgcagaacc
tctggaattccttctccagacgtaagctggtatctaggcaacttggtcacaagttatcag
cagcagtacaacctaaagcaacactatacaacgctcaagatgataaatgtttcttccaat
gatactggaaaaacagtgttgtgtattgcagaaaatattgtgggggaaaatgagtcttca
gttattctggttgtgcattttccaccaaaaataacatttttagaccaggcagtactggac
caccactggtgcattccattcagtgtaagagggaacccaaagccaaagctaatttggttc
tatgaagggtctgttttaaatgagaccgacttcatctggactagtattcacattgcctat
gacagcgaacaccacggctgcctgcaactagatagccccactcatctcaacaatggccaa
tacactctgctggcaaagaatgactatgggacagatgaacgtactgtttctgctcatttt
atgcaagacccatgtatagattgcacagaacctccttattatgactatacctcggatccc
gcacccaccaatgttccagatgtggaaccagacagcgttgctgtgtatgtagtggtgggc
attgctgctatggcattcacaggatttgtgctgatgttgatcgtactgaaattcggaaga
aactccaaatttggaattaaaggaacttcttcagtgatcagcaacgatgatgactcagcc
agccctctgcatcacgtgtccaatggcagtaacaccccctcttcatcggaaatgggttct
gatgccgtcatcattggaatgacgaagattccagtcattgaaaacccccagtatttcagg
agcactaacagcatgctgaagtctgacacttttgtccagcacatcaagcgccacaacatt
gtcctgaagagggagctaggagaaggggcctttgggaaggtgttcctggcagagtgctac
aacctctgtccggatcaagacaaaatcctggtggctgtcaaggccctgaaggaggccagt
gaaaatgcccgtaaggactttcaccgggaagctgagttactgaccaacctgcagcatgag
cacattgtgaagttctatggtgtttgtgtagagggggatcctctaatcatggtctttgag
tacatgatgcatggagatcttaataagttcctcagggctcatggtcccgatgccgtgtta
atggcagacggtcagaataatcaccctgctgagctgaccccatctcagatgctgcacatc
gcccagcagattgcagcgggcatgatgtacctggcatctcaacactttgtgcaccgtgac
ctcgcaaccaggaactgcctcgttggtgaaaacctgctggtgaagattggggactttggg
atgtcaagggatgtgtacagcactgactactaccgggtaagtgttgggggtcacaccatg
ttgccgattcgctggatgcctccagagagcattatgtacaggaagttcactacagagagt
gatgtctggagcctgggtgtagtattatgggaaatcttcacctatggcaagcaaccatgg
taccagctttcaaacaatgaggtgattgaatgcatcactcagggacgagtcctacagcga
cctcgcaacagcccaaaagaagtgtatgacctaatgttgggctgctggcagcgtgaaccc
cacatgcggctgaatattaaggaaatacacagcctccttcagaatctggctaaggcttca
cctgtatacctggacatactaggctaa
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