KEGG   Polyodon spathula (Mississippi paddlefish): 121318723
Entry
121318723         CDS       T07273                                 
Symbol
cetn2
Name
(RefSeq) centrin-1
  KO
K10840  centrin-2
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    121318723 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121318723 (cetn2)
   03036 Chromosome and associated proteins [BR:pspa03036]
    121318723 (cetn2)
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121318723 (cetn2)
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     121318723 (cetn2)
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    121318723 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     121318723 (cetn2)
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      121318723 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EH EF_EFCAB10_C SurA_N_3 EF-hand_14 SRI Dockerin_1 DUF7645 SUB1_ProdP9 TRCF DUF5580_M LETM1_RBD
Other DBs
NCBI-GeneID: 121318723
NCBI-ProteinID: XP_041111651
LinkDB
Position
7:51063553..51066658
AA seq 172 aa
MATSYKKPSLGATSQRKKTGPKPELTEEMKQEIREAFDLFDTDGSGYIDVKELKVAMRAL
GFEPKKEEIKKMIVEIDKEGTGKIDFNDFLAVMTHKMVEKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY
NT seq 519 nt   +upstreamnt  +downstreamnt
atggctactagctacaagaagccatcactgggagccacttctcagcggaagaagactggc
cccaagccagagctgacggaggagatgaaacaggagatccgggaagcgtttgacctcttc
gatacagatggatccggatacattgatgtgaaggagctaaaggttgctatgagagcgctg
gggtttgaacctaaaaaagaagaaataaagaaaatgattgtggaaattgataaggaaggg
actggaaagatagacttcaatgactttctggcagtgatgacccacaaaatggtagaaaag
gattcaaaggaggagattctaaaagccttccgcttgtttgatgatgatgaaactgggaag
atctcattccggaacctaaagagagtggcgaaagagcttggagagaacctgacggacgag
gagctacaggagatgatcgatgaggctgacagggatggagatggcgaggttaatgaacaa
gagttcctgcgcatcatgaagaagaccagcctgtattaa

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