Polyodon spathula (Mississippi paddlefish): 121318753
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Entry
121318753 CDS
T07273
Name
(RefSeq) ubiquilin-1-like isoform X1
KO
K04523
ubiquilin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121318753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318753
03051 Proteasome [BR:
pspa03051
]
121318753
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121318753
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121318753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
YukD
Herpes_pp85
UBA_HOIP
CUE
ATG8
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
121318753
NCBI-ProteinID:
XP_041111709
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Position
1:40406028..40424854
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AA seq
558 aa
AA seq
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MAENGETPGPFSDPKIIKVIVKTPKEKEEFAVPENSTIKQFKEEISKRFKTQIDQLVLIF
AGKILKDQDSLTQHAIHDGMTVHLVIKTQTRSQDHAAQSSSSSTSSSAAASSESRSTTAS
TMPASSSPLGVGGLGGLASLSGFGMNSSNFSELQIQMQQQLMSNPEMMAQIMENPFVQSM
LSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRA
LSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFASLVNNLAAGGSQPSRTENRDP
LPNPWAPPAASSQTSSSSSTATAAPSPAQGPSLPNLGPGLGAGLFNTPGMQSLLQQITEN
PQLMQNMLSAPYVRSMMNSLSHNPDLAAQVMLNNPLFNGNPQLQEQMRQQLPVSLQQMQN
PETLSAMLNPRAVQALLQIQQGLQTLAAEAPGFIPGFGQGNVGGVGSVGGTGSTPSTGSD
LSSQGSGEMGQQQLVQQMLQALASPNPQMQSPEVRFQQQLEQLSAMGFLNREANLQALIA
TGGDVNAAIERLLGSQPS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaatggggagaccccgggacctttctctgatccaaaaatcatcaaagtgata
gtgaaaactcccaaagaaaaagaggagtttgccgttcctgaaaacagcaccatcaagcag
ttcaaagaagaaatttccaagcgcttcaagacacagattgatcagcttgtgttgatattt
gctggtaaaatcttgaaagaccaagactctcttactcaacatgcaatccatgatgggatg
actgttcacctggtcatcaaaacgcaaacgaggtcacaggaccatgctgctcaatcgtcc
agcagctcaactagcagtagtgcggctgcctcttcagagtcccgcagcacaactgcgtcc
accatgccagcatccagcagtcccctaggtgtgggtggccttggagggctggcaagtcta
agcggctttggaatgaactcgtcaaacttctcagagttacagatccagatgcagcagcag
cttatgtcgaatcctgaaatgatggcccagatcatggaaaacccctttgtacaaagcatg
ctctccaatccggatctgatgaggcagttaattatggcaaacccccagatgcagcagttg
attcagcgaaatcccgagattagtcacatgctcaataatccagatataatgagacaaaca
ttggaacttgccagaaacccagctatgatgcaagagatgatgagaaatcaggacagagct
ctgagcaaccttgaaagtattccaggaggctacaatgcattacggcggatgtatacggat
attcaagagccaatgttaaatgctgctcaagaacagtttggtggcaatccctttgcttct
ttggtaaacaatctagctgctggtggtagtcagccgtcacgtacagagaatagagatcca
ttaccaaacccttgggcacctcctgcagcaagctcacaaacctcctcctcctcctccact
gccactgctgcccccagcccagcacaaggccctagcctgccaaacctgggaccaggcctg
ggagcagggctgtttaacacacctggaatgcagagccttttgcagcagataacagaaaac
ccacagctaatgcaaaacatgttgtctgccccatacgtgagaagcatgatgaattcactc
agccacaaccctgatctagctgcacaggtgatgttgaacaaccctctttttaatggaaat
ccccagttacaagaacagatgagacagcaattaccagtctcccttcagcagatgcaaaat
ccagaaaccttgtcagccatgttgaatcccagagcagtgcaagcactattacagattcag
cagggcttgcagactttggcagcagaagcaccaggctttataccaggttttgggcaaggt
aatgtaggaggtgttggtagtgttggaggcacagggagtaccccttcaacagggtctgat
ctcagttctcaaggaagtggagagatggggcagcagcagttggtacagcaaatgttacaa
gcacttgccagtccaaatccacagatgcagagccctgaagtgagatttcagcagcaactc
gaacagctcagtgcaatgggatttcttaaccgtgaagccaatctgcaagctctgatagca
acaggaggcgacgtcaatgcggccattgagaggctactgggctcccaaccatcatag
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