KEGG   Polyodon spathula (Mississippi paddlefish): 121318765
Entry
121318765         CDS       T07273                                 
Name
(RefSeq) charged multivesicular body protein 1b
  KO
K12197  charged multivesicular body protein 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272  Virion - Hepatitis viruses
pspa04144  Endocytosis
pspa04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    121318765
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121318765
  09143 Cell growth and death
   04217 Necroptosis
    121318765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121318765
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspa04147]
    121318765
Membrane trafficking [BR:pspa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    121318765
Exosome [BR:pspa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121318765
  Exosomal proteins of other body fluids (saliva and urine)
   121318765
  Exosomal proteins of colorectal cancer cells
   121318765
SSDB
Motif
Pfam: Snf7 Ist1 DUF948 HrpE-like
Other DBs
NCBI-GeneID: 121318765
NCBI-ProteinID: XP_041111732
LinkDB
Position
7:complement(52381708..52387999)
AA seq 200 aa
MSNMDKQLFNLKFAAKELSRNSKKCDKEEKAEKLKVKKAIQKGNMEVARIHAENAIRQKN
QSINFLRMSARVDAVAARVQTAVTMNKVTKSMAGVVKSMDSTLKSMNLEKISALMDKFEQ
QFETLDVQTAHMEDTMSSTTTLTTPQNQVDTLMHELADEAGLDLNMELPQGQTGSVGTSV
ASAEQDELLRGSEARLRDQV
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtcgaatatggacaaacagttgtttaacctgaagtttgctgcaaaggagctgtctcga
aattccaaaaaatgcgacaaagaagaaaaggcagaaaagctgaaggttaagaaggctatt
cagaaaggaaacatggaggttgctaggatacacgcagaaaatgccatccgtcaaaagaac
cagtccatcaatttcctgcgtatgagtgcacgagtggacgcggtggcagcaagggtgcag
acagcagtgaccatgaacaaggtaaccaaatcaatggcaggagttgttaagtccatggat
tccacactgaagagcatgaaccttgaaaagatctcagccctgatggataagtttgagcag
cagtttgaaacgctagatgtacagactgcacacatggaggacactatgagcagcactaca
acactgacaacaccacagaatcaagtggacacacttatgcatgagttggcagatgaagcc
gggttggacttgaacatggaacttccccagggccagactggttcagttggtactagtgta
gcttcagcagaacaggatgaactcttgagagggtctgaggcacgcctgcgagatcaggtg
taa

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