Polyodon spathula (Mississippi paddlefish): 121318777
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Entry
121318777 CDS
T07273
Name
(RefSeq) highly divergent homeobox-like isoform X1
KO
K24884
highly divergent homeobox
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121318777
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121318777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121318777
NCBI-ProteinID:
XP_041111753
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Position
7:complement(52717641..52737788)
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AA seq
741 aa
AA seq
DB search
MEIWKDKRNMENMNLRSVFTLEQQRILQRYYNNGMTNQSKSCFQLILQCAQEAKLDFSVV
RTWVGNKRRKLTAKSDQNGSPHSSSNHTVGGGSGGVGGGGGSVVLPTELPVRSVANSFRG
ASQTQLLPAASSSSSSINNISNTTNNNGSTSCNDVIVTGVYTLAKSSSRAETASQTNSII
HKTVSKCRSETELQPPRDLQLKTTSPVNSFSSKAVSLPRKPVQLSPTNAVYCHIKKSFPA
AGTQPVEPLCLPRTAAWDRQYTQQQWSFPSDQQPSNSMSRVRDSCPAGNVKIKQVFTLAP
GGSEQQQQQQSRVFGQSLPPQQQHSRPRPVESSGCFSIAMETGDVDDEYAREEELANMGA
QMQICPSGVLEPSALRLKDSPGAMSAGRGGAGGTLGSQPGSSDLSPTSLYPGSRDYQTPS
TSSHYLSGSAAVFNSGSVVKARSNYPAKFHSAPSSRSSPQRMGTYQASGNLPIPWITSNS
RKRTLQDRTQFSDRDLATLKKFWDNGMTSLGSVCREKITAVSTELNVDCEIIKTWIGNRR
RKYRLMGIEIPPPKGGPADFTDQTDPGSPGTLTPGEHTPKTSDQAEDSDHNDEVSICLSE
DGASDAYQRESGEDGDGETNNATSADNVKIEIIDDNEEDGCTSDFEQMQTLLEYKNDEVQ
YLEQELENQKQRYYDLQTFTRNLVAAVKSNDTEQQQALLLSLPQEVEGEWDFSHVSSEQS
DPMVMIQTYSSVSEEKGAADT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggaaagacaaaaggaatatggaaaacatgaatctccgctccgtcttcaca
ctcgagcagcagcggattctgcagcgttactacaacaatggaatgaccaatcagagtaag
agctgcttccagctcatcctgcaatgtgctcaggaggccaaactggacttcagcgtggtg
cggacgtgggtcggcaacaaaagacggaaactgaccgccaagagtgaccagaatggatct
ccacacagctcgtccaatcacactgttggtggcggcagtggcggtgtgggaggagggggt
gggagtgtggtcctgccaacagagcttccggtgcgtagtgtggcgaacagctttcgtggt
gcatcacagacccagctcctgccagcagcctcttcctcctccagtagcatcaataacatc
agcaacaccacaaacaacaacggcagcaccagttgcaatgatgtcatagtcactggcgtc
tacaccctggcgaaatcctccagccgggccgaaacagcctcccaaaccaacagcattata
cacaagactgtctctaagtgccgcagcgagactgaacttcagccgccacgtgatctccag
ctgaagaccaccagcccggtgaattccttcagcagcaaggcggtctcacttccaaggaag
ccggtacagctcagccccacaaatgcagtctactgccacatcaagaaaagcttccctgct
gcgggcacccagccggtcgagccgctgtgcctccctaggacggctgcttgggatagacag
tacacgcaacagcagtggtcttttccctctgatcagcagccctccaactcaatgtccagg
gtgcgggactcttgtccagccgggaatgtcaaaatcaagcaggtgtttaccctggcccct
ggggggagcgagcagcagcagcagcagcagtcgagggttttcggacagtcgctgccccct
cagcagcagcacagcaggccccggccggtggagagctctggctgcttctctattgccatg
gaaactggtgatgttgatgatgagtatgccagggaggaggagttggccaacatgggcgcc
cagatgcagatctgccccagcggtgtcttggaacctagtgctctgcggttgaaggacagc
cctggggcaatgtcggcggggcggggtggggctggagggacgctaggatcgcagccaggc
agctcagacttgtcccccacctctctctaccctggcagcagggactaccaaacgccgtca
acctcttcccactacctgtctggctcggctgcagtcttcaacagcggcagtgttgtcaaa
gcacgcagtaactacccagccaagtttcactccgcacctagcagccgcagctcaccccag
agaatgggcacctaccaggcgtcaggaaacctaccgatcccctggattacaagtaactcc
agaaaaagaacattacaggatcggacacagttcagtgaccgagacttggctacgctgaag
aaattctgggataacggaatgaccagcttggggtcagtctgcagggagaaaatcacagct
gtgtcgaccgagctgaacgtggactgtgagatcatcaagacctggattgggaaccgccgc
aggaagtaccgcctcatgggaattgagatcccgcccccaaaaggaggaccagctgacttc
actgaccaaacagatccggggtcaccggggacgctgaccccaggggagcacacgcccaag
acgtcagaccaggcagaggacagcgaccacaatgacgaggtgtccatctgtctgtctgaa
gacggggcgagtgatgcgtatcaaagagagagcggggaagacggtgatggagaaacgaat
aacgccacctcagccgacaacgtgaaaatagaaataattgatgacaatgaagaagacggc
tgtacttctgatttcgagcaaatgcaaacgctgcttgaatacaagaatgatgaagtccaa
taccttgagcaagagctagagaaccaaaaacaaagatactacgatctccagacatttacc
agaaacttggtagccgctgtgaagtcaaacgatacagaacagcaacaggcgctgctgttg
agtttacctcaagaagtagaaggagaatgggacttcagccatgtatcttcagagcagagt
gatcccatggtaatgatccaaacgtattcctctgtatcagaggagaaaggtgctgcagac
acgtga
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