Polyodon spathula (Mississippi paddlefish): 121318782
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Entry
121318782 CDS
T07273
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121318782
04330 Notch signaling pathway
121318782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121318782
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
121318782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Motif
Other DBs
NCBI-GeneID:
121318782
NCBI-ProteinID:
XP_041111765
LinkDB
All DBs
Position
1:40949296..41011597
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AA seq
779 aa
AA seq
DB search
MFPQSRHPTPHQPSGHPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLSSEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELN
AVIGVRGLPGLPPTQQQLQAQHLPHGHGPPVPLTPHPSGLHPSGLHHLGSSAGLLALSNA
LGGQPHLPIKDDKKSHHDSDHHREKEPSTSNSLMVPESLRGSDKRRNGPEFSNDLKKRKV
DDKDSSHYDSDGDKSDDNLVVDVSNEDPASPRGTPAHSPRENGLDKTRLLKKDASSSPAS
TASSSSSLSLKSKEMSMHEKTSAPVLKSTTPTPRRDASTPGTSATPGLRPNLGKPPSMEQ
LVNHTAAGLRAPLAVPGPYPSPFGMVPHAGMNGDLTSPGAAYASLHNMSPQMSAAAAAAA
VAAYGRSPMVGFDPHPHMRGIPPNLAGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI
PRHARQINTLSHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDN
YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS
CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL
QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLQFAYCGK
WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcaaagcagacatcccacgccgcatcagccttcgggacacccctttaaattt
actatccccgagtccttggatcggataaaagaagaatttcagtttctacaagctcagtat
cacagtctgaagctggaatgtgagaagctgtccagtgagaaaacagaaatgcagaggcac
tatgttatgtactatgaaatgtcttacgggctcaacattgaaatgcataaacagacagag
attgcaaagaggttgaatactatttgtgcacaggtcatcccatttctgtctcaggaacac
caacaacaagttgcacaagcagtggagcgagccaagcaagtgaccatggcagaactgaac
gccgtcatcggagtgcgtggccttccaggtctacctcctacacagcagcagctacaggcc
cagcatctgccccatggccatggccctccagtgcctctcaccccacacccttctggactg
cacccttctggactgcaccacctgggcagcagcgcaggtctcctggctctttccaacgct
cttggtgggcagcctcacctgccaattaaggatgacaagaaaagccaccatgactccgac
caccacagagagaaagaaccaagcacaagtaattccttgatggtccccgaaagtctgcga
ggctcagataaacgtcgaaatggaccagaattttcaaatgacttgaagaaaagaaaagtt
gatgataaagattcaagccattacgacagtgatggagacaaaagtgatgacaacttggta
gtcgacgtttctaatgaggaccctgcttcaccacgtggtactcctgctcattcgccaagg
gagaacggtctggacaaaactcgtctgctgaagaaggatgcttccagcagtccagcatca
acagcatcctcaagcagctccttgtccctcaagtccaaagagatgagcatgcatgaaaaa
accagcgcacctgtgttaaaatccactacaccaactccacgccgggacgcgtccactcca
ggcaccagtgccacccccggtctgcggcccaatctaggcaagcctccgtccatggagcaa
ctagtgaaccatactgctgcagggttgcgggcccccttagcagtcccaggtccctatccc
agtccgtttggtatggtgccccatgctgggatgaatggagatctgaccagtccaggggct
gcttacgccagtctccacaacatgtcacctcagatgagtgctgctgcagctgctgcagca
gtggcagcctatggacgctcccccatggttgggttcgatccacatcctcacatgcgagga
attcctccaaatctggcaggaatccctggcggaaaaccagcatactcatttcatgtgagt
gctgacggacagatgcagcctgtgcccttccctcctgatgctctgattggtccggggatc
cctcggcacgcccgtcagatcaacactttgagtcacggagaggtggtgtgcgcagttacc
atcagcaatcccactagacacgtgtatactggtggcaagggctgtgtgaaggtctgggac
atcagccagccaggcaacaagagcccagtgtctcagttggactgcttgaacagagataac
tacatccgctcctgtaaattgctgcccgatggatgcaccctgattgtcggcggggaggcc
agcacgttatccatctgggacctggcggctcccaccccacgcattaaggccgagttgacg
tcctcggcgcctgcctgctacgctctggccatcagtcctgactccaaggtgtgcttctcc
tgctgcagtgacggcaacatcgcagtctgggacctgcacaaccagacactagtcaggcaa
ttccagggccacacggatggagccagctgtattgatatttccaatgatggcaccaagctg
tggacagggggcttggacaacacagtcaggtcttgggacctccgagaaggaaggcagcta
cagcaacatgatttcacttcccagatcttttcccttgggtactgtccaactggagaatgg
ctggctgtaggaatggagagcagcaacgttgaagtgttgcacgtgaacaaaccagacaag
taccaactgcacctccacgagagctgtgtactatcattgcagtttgcttactgtggtaaa
tggtttgtgagcactgggaaagataacctgctgaatgcctggcggaccccttacggagcc
agcatattccagtccaaggaatcgtcctccgtgcttagctgcgatatctctgtggatgat
aaatacattgtcacaggctccggggacaagaaggccaccgtctatgaagtcatctactga
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