Polyodon spathula (Mississippi paddlefish): 121318785
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Entry
121318785 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318785
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121318785
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121318785
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121318785
NCBI-ProteinID:
XP_041111772
LinkDB
All DBs
Position
7:complement(52944279..52957601)
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AA seq
334 aa
AA seq
DB search
MSRPSSAGGGGGGLGAGKAGGGKHGVSAGAAAAAAAAVAAAAAAAAAAAAAAAAGVAGSA
AGSGSVTPAAAAALPTAGLPCQAAELTAVFECPVCFDYVLPPILQCQAGHLVCNQCRQKL
SCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTC
PCPGASCKWQGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHH
FMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVA
SAIMNSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagccggccgtcctctgcgggcggcggaggcggaggactcggggccgggaaagcaggg
ggtggaaagcacggtgtctctgctggggcagccgccgctgctgcagctgcagttgctgcc
gccgccgccgccgccgccgccgctgcagctgctgctgctgctggagtggccggatcagcg
gccggatcaggctcagttactccggctgccgctgctgctttgcccaccgcaggcctcccg
tgccaggccgcagaacttactgctgtttttgagtgcccggtgtgttttgattacgtgctg
ccaccgatcctgcaatgccaggccgggcacctagtgtgcaatcagtgccgacaaaagttg
agctgttgcccaacctgtcgcgggcctctaacccccagcatcaggaacttggccatggaa
aaagtggcttccactctcccgttcccatgcaagtatgcctcggccggctgcctgctctcc
ttgcaccacagcgagaagccggagcatgaagaggtgtgtgagttccggccttacacttgc
ccctgcccgggggcctcctgcaagtggcagggctcgctggaggcagtcatgccccacctg
atgcacgcccacaagagcatcaccacgctgcaaggcgaggatatagtcttcctggccaca
gacatcaacctgccgggggccgttgactgggtcatgatgcagtcctgcttcggccatcac
ttcatgctggtgctggagaagcaggagaagtatgagggccaccagcagttctttgccatc
gtgctgctcattgggacccgtaaacaggccgagaactttgcctaccgcctggaactcaat
gggaaccgccgccggctgacgtgggaggccacgcctcggtccatccacgacggcgtggct
tctgctatcatgaacagcgactgcttggtctttgacacctccattgcccacctctttgca
gacaatggcaacctgggtattaatgtcactatatccatgtgctga
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