Polyodon spathula (Mississippi paddlefish): 121318808
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Entry
121318808 CDS
T07273
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121318808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121318808
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121318808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
HTH_WhiA
Motif
Other DBs
NCBI-GeneID:
121318808
NCBI-ProteinID:
XP_041111818
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Position
7:54403919..54416947
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AA seq
827 aa
AA seq
DB search
MAKMKKVSETKSGAAVNPLSESVESSYKAVKETMEEEEEEELFHTEYAISASEDEAQSDD
ERKHCKLLEAISALDGKKRRKLAERSEASTQVSEFSVSAEGAGEKIDLKDLLGTIAPAAP
SMSSIKKQLNKLQYKNKTLELPLSRQETDQIQRVVAYEKTSKKVTRWDHVVRQHRKAEQL
VFPLNQEPGGIKPVEQIVASWKVRTPLELEIFNLLHKNKQPVTDPILTPVEEASLRAMSL
EEAKMRRAELQKARALQSYYEARAKRERRIKSKKYHRVLKKAKQKEVLKEFEELRKTNPD
AALEELKKMDRSRIEERMSLKHQNSGKWAKSKAIMAKYDDEARRAMQQQLEVNKELTRKL
VGPSESEEEEPEEEEEEEVLPGFVNEAQLSTDYANPWMQGKLSSDPTELAGEAGGETETP
ALGGAMEESEEEEEEEDEALLREFEERRRLRKEQEEDIVPAEEDKEDAGEERCDEVEEED
VSEFNSLFQRLVGNKPKTQAAKRAARPPAPQGEGESQEQRKEDSEEREEPPLLEESLTRV
QTMENLENLEREETLEAEVPEPDSTMTGPGIQTEEEKPTSKAGKRKKVIDPEEVLTRQAK
VIKVPSAPTAIEDEEGDEEQKMIIKEAFACDDVIADFLKDKQKQTEMSKPKDVDLTLPGW
GEWGGVGLKPSTRKRRRFLIKAAPGPPRRDRNLPNVIISEKRDASVAAHQVNDLPFPFSN
PTQFERNIRAPIGHNWNTQRTVQKLTAPKVITKMGTIIDPIDEEDLAIDKKPPVQLRIAD
ILLTKEEKGKKNTEHKDRRPQSKRPQNKRRPQKRIDKKNQQKSKKAA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgaagaaagttagtgaaaccaaaagcggggctgctgtaaatccattgagt
gagagcgtggagtccagttacaaggctgtaaaggagactatggaggaggaggaggaggag
gaactgtttcacacagagtatgccatcagcgcaagtgaggacgaggcccagagcgatgat
gagaggaaacattgcaaactgctggaggccatcagtgccctggatgggaagaaaaggagg
aagctggctgagaggtcagaggccagcacgcaggtgtcggagttcagcgtcagtgctgaa
ggtgctggggagaaaattgatctgaaagacttgcttgggacgatcgcccccgctgccccg
tcaatgtcctccatcaagaagcagctgaataaactgcagtacaaaaataagaccctggag
ctgcccctgagcaggcaggagacagatcagatccaaagggtggtggcctacgagaagact
tcgaagaaggtgactcgctgggaccatgtggtgcgccagcaccgtaaggctgagcagctg
gtgttccccttgaaccaggagccaggggggatcaaacctgtggagcagattgtggccagc
tggaaggtcagaacccccctggagctggagatcttcaacctcctgcacaagaacaagcaa
cccgtcaccgaccccatcctgacccctgtagaggaggcctcgctccgagccatgagcctc
gaggaggcgaagatgcggcgtgcagagctgcagaaggcccgtgcgctccagtcctactat
gaggcgagagccaagagagagagaagaataaagagcaagaagtaccacagggtcctgaag
aaggcgaagcagaaggaggtgctgaaggagtttgaggaactgcgaaagacaaacccagac
gctgctctcgaggagctcaagaagatggatcggtccaggatagaggagcgcatgtccctg
aagcaccagaacagcggcaagtgggccaagtccaaagccatcatggctaaatacgatgac
gaggcccgcagagctatgcagcagcagctggaggtgaacaaggagttgactaggaagctg
gtggggccctcagagagcgaggaagaagagcctgaggaggaggaggaggaggaggtcttg
cccggctttgttaacgaggcccagctcagcaccgattacgccaatccgtggatgcagggg
aagctgagctctgacccgactgagctcgctggggaagctggtggggagacagagacccca
gcactagggggtgctatggaggagagcgaggaagaggaggaggaggaagacgaggctctg
ctcagggagttcgaggagaggcggcgcctccggaaagagcaggaggaggacattgtccct
gcggaggaggataaggaagatgctggagaagagaggtgtgatgaggtagaggaagaggac
gtgtccgagtttaacagcctcttccagagactggtgggaaacaagcccaagacccaagca
gcaaagcgggcagccaggccgcctgcacctcagggggaaggagagagccaggagcagagg
aaggaggacagcgaggaaagggaagagccccccctgctggaagagagcctcactcgggtt
caaactatggagaatctggagaacctggagcgagaggaaactttagaagctgaggtgcct
gaaccagacagcaccatgacagggccaggcatacagacagaggaggagaaaccgaccagc
aaggcagggaagaggaagaaggtgattgaccctgaggaggtgctgaccagacaggccaaa
gtgatcaaggtgccctcagcccccaccgccattgaggatgaggagggtgatgaagagcag
aagatgatcatcaaggaagcctttgcctgcgatgacgtcatcgctgacttcctgaaggac
aagcagaagcagacagagatgtccaaacccaaagacgtagacctgaccctgccgggctgg
ggggagtggggcggagtggggctcaaaccctccacgaggaaacgaaggaggttccttata
aaagcagcccccggccctcccagacgagatcgcaacctgcctaatgtgatcatcagtgag
aagagggatgcttcagtagcagcccaccaggtcaatgatctgccctttcccttcagtaac
ccgacacagttcgagcgcaatatccgggcgcccatcggccacaactggaacacccagcgt
actgtgcagaagctgaccgcacccaaggtcatcaccaagatgggcaccatcatcgacccc
attgacgaggaggatcttgccatagacaagaaaccaccagtccagctgcggattgcggac
atcctgctgacaaaggaggagaaggggaagaaaaacacagagcacaaagacaggagaccc
cagagcaagagaccccagaacaagaggagaccccagaaacgcatagacaagaagaaccag
cagaaatccaagaaggctgcctga
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