Polyodon spathula (Mississippi paddlefish): 121318829
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Entry
121318829 CDS
T07273
Name
(RefSeq) lysosome-associated membrane glycoprotein 2-like isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa03273
Virion - Lassa virus and SFTS virus
pspa04140
Autophagy - animal
pspa04142
Lysosome
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121318829
03272 Virion - Hepatitis viruses
121318829
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121318829
04142 Lysosome
121318829
04140 Autophagy - animal
121318829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121318829
04090 CD molecules [BR:
pspa04090
]
121318829
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121318829
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
121318829
Other autophagy associated proteins
RNautophagy/DNautophagy
121318829
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
121318829
CD molecules [BR:
pspa04090
]
Proteins
121318829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Methyltrn_RNA_4
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
121318829
NCBI-ProteinID:
XP_041111856
LinkDB
All DBs
Position
7:54708869..54724124
Genome browser
AA seq
443 aa
AA seq
DB search
MYSCIGLAVVLLLGCGVLQSDATVAEVLDENNKTCIYAEMMVNFTVQYETSNSTPSTAEF
VLPTNVTTAGSICGNETVAPFLKISFGNGHYWSINFTHSNTSYHGDVFIFGYNVSDSTIF
HNASQKGVIKVVANDTMPPVPMDHYYRCMSDDVFKQGNVTQTFWNVSIQAYIKDGNRSKD
ATVCSADTPTTVAPVTNITTVAPVTNITTVAPVTNITTVAPTATPKPTPTPKPDKETYKV
SRGNETCLIITMGLQLNYSTTAQAPWKVKNIEPNVTTASGACGGNTSTIILNERDTVYLV
FSFVTRSSKTFYLKGVNVTTVVNGSAQQLGINNNLSYWEATLGSSYMCNKDQVFKVTDKL
YINTYDLRVQPFNVTNGKYSTGDDGGPASGLWSNSIKDARTCYRRQYTQYLLLHSSNVQE
CSNMTPAEERDCNRQGPGPLERP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtacagctgcattggcctagctgtcgttctgctgttaggctgtggagttctacagtct
gatgcaacagtagcagaagttttagatgagaacaataagacatgcatctacgctgaaatg
atggtgaatttcacagttcaatatgagaccagcaattcaacacctagcactgcagaattt
gtcctgccaacaaatgtaacaacagcaggaagcatctgtggcaatgagacagtcgcccct
tttttaaaaatcagttttgggaatggccactactggagcattaacttcacacatagcaat
acttcgtaccatggagatgtatttatctttggctataatgtcagtgacagcaccatcttt
cataatgcctctcaaaaaggtgttatcaaggttgtggccaatgacacaatgccacctgtg
cccatggatcactactacagatgtatgagtgatgacgtttttaagcaaggcaatgtcacc
cagaccttttggaatgtcagtattcaagcgtacattaaagatggaaatcgaagtaaagat
gccactgtgtgtagtgctgataccccgacgactgtagctccagtgactaatataacgact
gtagctccggtgactaatataacgactgtagctccagtgactaatataacgactgtagct
cccactgctactcctaagccaactccaacccccaaaccagataaggaaacatacaaggtt
tccaggggcaatgagacatgcctgattatcaccatgggactgcagctcaactacagcacc
actgctcaggcgccgtggaaagtgaagaacattgaacccaatgtaaccactgcgtcggga
gcctgtgggggcaacacctctaccataatactgaatgagagagacaccgtttatcttgtt
ttctccttcgttacacgcagttcaaagacattctatcttaaaggagtgaatgtaaccaca
gtggtcaatggctctgcacaacaacttggaattaacaacaatctaagttactgggaggca
accctgggcagctcctacatgtgcaacaaggaccaggtgttcaaggttaccgacaagctc
tacatcaacacttatgatctgagggtgcagcctttcaacgtgaccaacggaaaatattct
acaggtgacgatggcggtccagcgagcgggttgtggagtaacagcattaaagatgcgcgt
acttgttaccgccgccagtatacccagtatctcctgctgcactcgagcaacgttcaggaa
tgcagcaacatgacaccagccgaggagcgagattgcaacaggcagggaccagggccgttg
gagagaccctga
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