Polyodon spathula (Mississippi paddlefish): 121318838
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Entry
121318838 CDS
T07273
Name
(RefSeq) septin-6 isoform X1
KO
K16939
septin 6/8/11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121318838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121318838
04812 Cytoskeleton proteins [BR:
pspa04812
]
121318838
04147 Exosome [BR:
pspa04147
]
121318838
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Sperm associated proteins
121318838
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
121318838
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121318838
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
GTP_EFTU
Roc
AAA_22
AAA_16
AAA_29
Ras
UBA_NBR1_C
ATG14
AAA_7
TPR_MLP1_2
ABC_tran
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
121318838
NCBI-ProteinID:
XP_041111874
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All DBs
Position
7:54791805..54812679
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AA seq
434 aa
AA seq
DB search
MAATEVTRQAGEGLRTVPLSGHVGFDSMPDQLVNKSVNHGFCFNILCVGETGLGKSTLMD
TLFNTKFEGEPAQHSQPGVQLKSNTYELQESNVRLKLTVVNTVGFGDQINKEESYKSVVE
FIDTQFEAYLQEEMKIKRTLHSYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNII
PVIAKSDAISKSELTKFKIKITSELVSNGVQIYQFPTDDETVAEINANMNAHLPFAVVGS
TEEVKIGNKMVKARQYPWGTVQVENENHCDFVKLREMLIRVNMEDLREQTHARHYELYRR
CKLEEMGFKDTDPDCKPFSLQETYEAKRNEFMGELQKKEEEMRQMFVQRVKEKESELKEA
EKELHDKFDRLKKLHQDEKKKLEDKKKLLDDELNVFKQRKTAAELLQAQALQAGGSQTLK
KDKERKNNPWMCIE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagaggtaactcggcaagcgggagaaggtcttcgtactgttcctctgtct
ggtcatgtgggctttgacagcatgccggaccagctggttaacaagtccgttaaccacggc
ttctgcttcaacatcctctgtgtgggtgaaactggtctggggaagtccactctgatggac
actctgttcaacaccaagtttgaaggggagcccgcccagcacagccagcccggagtccag
ctcaaatccaacacctacgagctacaggagagcaacgtgcgcctcaaactcactgtggtc
aacaccgtggggttcggagaccagatcaacaaggaggagagctacaagtcagtcgtggag
ttcattgacacgcagttcgaggcctaccttcaggaggaaatgaaaatcaaacgcacgctc
cacagttaccatgactcccggatccacgcctgtctgtactttatagcccccactggccac
tcgctgaagtccctcgacctggtcaccatgaagaagctggacagcaaggtcaacattata
ccagtcattgccaaatcagatgccatctccaagagtgaactgacgaaattcaagatcaag
atcacaagcgagctggtcagcaacggcgtgcagatctaccagtttcccaccgatgacgag
actgtagccgagatcaacgccaacatgaatgcccatttgccatttgcggtggttggaagc
actgaggaagtgaagattgggaacaagatggtgaaagctcggcaatacccctgggggaca
gtccaggttgaaaatgagaatcactgtgacttcgtgaagctgagagagatgctgatccga
gtgaacatggaggacctccgcgagcagacccacgcccgtcactatgagctgtaccggcgg
tgcaaactggaggagatgggcttcaaagacacggaccccgactgcaagcccttcagtctg
caggagacgtacgaggccaaaaggaacgagttcatgggagagttgcagaagaaggaggag
gagatgagacagatgtttgtccagagagtcaaggagaaggaatctgagctcaaggaggca
gagaaggagctgcatgacaagtttgaccgcttgaagaagctgcaccaggacgaaaagaag
aagttggaggacaagaagaagctcctggacgatgagctgaacgtcttcaagcagaggaag
acggccgctgagctgcttcaggcacaggcgctgcaggcaggaggctcccagaccctcaag
aaggacaaggagaggaaaaataatccgtggatgtgcatcgagtag
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