Polyodon spathula (Mississippi paddlefish): 121318848
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Entry
121318848 CDS
T07273
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121318848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318848
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121318848
Endosome - Golgi transport
Arf GTPase associated proteins
121318848
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121318848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
121318848
NCBI-ProteinID:
XP_041111899
LinkDB
All DBs
Position
7:complement(55079988..55090854)
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AA seq
1274 aa
AA seq
DB search
MSKPLPRVVPPAGQAYPVPKPRKRTQSTLSEQSTAPPVPQPRRKSLCSILDSEMPQLQVV
SSKEGVNSKLGSPVSEEIEPQPNTDGSNKPDQKTNIPKTEHKPSTDSSTESQVKPSADLP
SGSDHKPGTDLSSGSDHKPGTDLSSGSDHKPSADLSSGSDHKPSGDLSSGSDQKPSIILS
NASDHKSSADLSTEADVNECDHKTSNELSTDCQMKPRADLSNGSDKPSTDLFNGSYKPSS
DLADDSDVRPIRDHDTESDDKCSANLTPESRVKPNVDPSRGSVKLSVSLPNDSDGKPSSD
VDDSKRNPTVDPSTETPSADFEASEHQPSSDCDESQPSSSADLSNASDHKPTPDLSTESP
HKPSSDLSLDSRNKMSSDGITKTQEKPLISETDLQSNHHGDWRGVTEESGEGGVKSSMCS
ASQGGTTESGQPKSRDSLFMGSRISQPRSCPRHTPSMRVSRRKHRFADCQVTAVNQPREQ
KPRGGSVVCRSGWLEVWQARRHKMMWVEFNGKTLSMFKKRTDKFTETVFPVSCITNVRPG
EGGKFFVSTLKKQYEFLAPSEGGRDGWVSSLGTPQKEATPEQIEQQGPLGLRELRTKVYA
ALRGHRLWVYHNKEDFREGVAMTAINMNVAQAKQTGRHSFDLTTPYKIFSFTADSSRELV
AWLGSLSRAVKSALSCSEVAERVWGSTWNRNCADCWSPDPEWASVNLLVVICDNCAGQHR
AMGTAVSKVRSLKMDKSVWTEPLIQLFILYGNKSANELWGDQVPSAEQICPESSAEQRRA
FIWAKYKQGRYRQLHPLYRSQEQMHQRLCEVGVTADVSETLALLCSGARVSIHQGEPSQP
SPISLAEQAGQAMQAELLRQNQFTEAPFQDTGVDPSPSENRSLQDTEEFHCKLDKDKLVF
SEEVDSAPCEVLNLKDVTSLFDCSTGQSHEFEMQILKERLLCTADNQETLRTQLRHIAKV
LLPWPVPDSELAGLRCLSRVTAREGKWPEHRDAWVALSGTELLLYLTGGRQGDRLRLTLS
ENYTFIATEKMFEIISPERTLSLRFEHSQPYEKWGVLLKEALQPPPSSPSFGGGPLYPSP
GRGSTRVPDPIERCISHITQHGLTVEGIYRRCGQVGKISRLVEGLCSTPCRAQFEEGEVG
VVDVSGALKQCLKLHTALFPEPHLSHWLQSAGIPGQAERLLGYREVLEQLSDEQRGILSR
LFGHLYQVQAYSQVNRMTPENLALVFVPTLFPDHALSTDAVKLTRELITHYTALFHGGEE
DDEEDSAGDLFTIL
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccccttcccagggtggtccccccagcgggacaggcgtacccagtacccaag
cctcgcaagcgcacccagagtaccctctcagagcagagcacagccccccctgtccctcag
cccaggaggaaatcactttgcagcattttagattctgaaatgccgcagctacaagtagtg
tccagcaaagagggagtcaactccaaactcggttctcctgtatccgaagaaattgagccc
caaccgaacactgatggatccaacaaacccgatcagaaaaccaacattcccaaaactgag
cacaagcccagcacagattcttctacagaatctcaggtcaaacccagtgctgatctgccc
agtggttctgatcacaaacccggtactgatctgtccagtggttctgatcacaaacccggt
actgatctgtccagtggttctgatcacaaacccagtgctgatctgtccagtggttctgat
cacaaacccagtggtgatctgtctagtggttctgatcagaaacccagcattattctgtcc
aatgcttctgatcacaaatcaagcgctgatctgtcaactgaagctgatgtcaatgaatgt
gatcacaaaacaagcaatgagctttctacagactgtcagatgaaacccagggctgatctt
tctaatggttctgacaaacccagcactgatctttttaatggttcttacaaacccagtagt
gatcttgctgatgattctgatgtcagacccattcgggatcatgatactgaatctgatgac
aaatgcagtgccaatctaactccagaatctcgagtgaaacccaacgttgatccttctcgt
ggttctgtcaaacttagcgtttctcttcccaatgattctgatggcaaacccagctctgat
gttgatgactctaaacgcaacccaactgtagatccttctacagaaactcccagcgctgac
tttgaagcatctgaacaccagcccagctctgactgtgatgaatcgcaacccagttccagt
gccgatctgtctaatgcttctgatcacaaacccactccagatctttctacagaatctcct
cacaaacccagctcggatttgtccctggatagtcgaaacaaaatgagttctgatggaatc
actaagactcaagaaaaacccttgatttctgaaactgatcttcaaagcaatcaccatggg
gactggcggggtgtgacagaagagtctggagaaggtggtgtgaagagctccatgtgttct
gcttcccagggggggacaacagagtcgggacagcccaagagccgggacagtcttttcatg
gggagccgaatctcgcagcccaggtcctgcccacgacacacccccagcatgcgcgtgagc
cgtcggaagcaccgctttgctgactgccaggtgactgccgtcaaccaacccagggagcag
aagccacgaggaggcagcgtggtctgtaggtctggctggctggaggtgtggcaggcaaga
aggcacaagatgatgtgggtcgagttcaatggaaagacgctgtccatgttcaagaaacgc
actgacaagtttacagagacagtctttcctgtgtcctgcattactaatgtccggccagga
gagggcggcaagttctttgtgtccacactcaagaagcagtatgagtttttggcacccagt
gagggaggtcgtgacgggtgggtgagttctctgggaacccctcagaaggaggcgacccca
gagcagatagagcagcagggccccctgggtctgagagagctccgaaccaaggtgtacgca
gcgctgagggggcacaggctgtgggtctaccacaacaaggaggatttcagagaaggtgtg
gcaatgactgctatcaacatgaacgtggcccaggcgaagcagacaggcagacacagcttc
gacctcaccaccccctacaagatattcagtttcacagcagattcttctcgggagctggtt
gcctggctgggctccctgtcccgggctgtcaagagcgccctgtcctgcagtgaggtggcg
gagcgcgtttgggggagcacgtggaatcgaaactgcgccgactgttggagtcctgaccca
gagtgggcttctgtgaacctgctcgtcgtcatctgtgacaactgtgcaggtcagcaccgt
gccatggggaccgctgtctccaaggtacgcagtctgaagatggacaagagcgtgtggact
gagccactcattcagctgttcattctgtacgggaacaagtcagccaatgagctttggggg
gatcaggtgccgtccgctgaacagatctgcccagaatcctctgcggagcagcggcgggcg
tttatctgggccaagtacaagcagggccgctaccgccaactgcacccactgtacaggagc
caggagcagatgcaccagcgtctgtgtgaggtgggggtgactgccgatgtgtcagagaca
ctggccctgctgtgttccggggcacgggtgagcattcaccagggggagccctcccagccg
tcccccatctccctggcagagcaggcagggcaggccatgcaggccgagctgctgcgccag
aaccagttcacagaggctcctttccaagacactggggttgacccttccccgtcagagaac
cgttctttacaagacactgaggagttccattgcaaactggacaaagacaagcttgtgttc
tcagaggaggtcgactctgccccctgcgaggttctcaatctgaaggacgtcacctcgctc
tttgactgctccacagggcaaagccatgagtttgagatgcagattctgaaagagaggctt
ctgtgcacagcagacaaccaggagaccctgagaactcagctgcggcacattgccaaggtg
ttgctgccatggccagtgccggactcggagctggcggggttgcgctgtctctcccgggtg
accgcgagggaggggaagtggccggagcacagagacgcctgggtggcactgagcgggact
gaactgctgctttacctcacaggagggcgccagggagacaggctgaggctgactctctca
gagaactacacctttatagcgacggagaagatgtttgaaatcatctcaccagagaggaca
ctgtcactgcggtttgagcacagccagccctatgagaagtggggtgtcctgctgaaggag
gctcttcaacctcccccgtccagcccctcttttggggggggccccctgtaccccagcccg
ggccgaggctccacaagagtgccagaccccatcgagaggtgcatctcccacatcacgcag
catggtctaaccgtggagggtatttaccggcgctgcggtcaagtggggaagatctctcgg
ctggtggaggggctctgcagcaccccctgcagggcgcagtttgaagagggggaggtgggg
gtagtggatgtgtcaggagccctgaaacagtgtctcaagctgcacacggcactctttcca
gagccacacctcagccactggctccagtctgcaggtatccctgggcaggcagagaggctg
ctcgggtatcgtgaggtactggagcagctgtctgacgagcagagaggcattctgagcagg
ctgttcggacacctctaccaggtgcaggcgtacagccaggtgaaccgcatgacccctgag
aacctggccctagtgttcgtgcccacgctgttcccagaccatgccctgagcaccgacgct
gtgaagctgaccagagagctcatcacacactacacagcgctcttccacggaggtgaggag
gacgatgaggaggattctgcgggggacttgttcacgattctctga
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