Polyodon spathula (Mississippi paddlefish): 121318865
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Entry
121318865 CDS
T07273
Name
(RefSeq) RNA-binding motif protein, X chromosome-like isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121318865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121318865
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
hnRNP proteins
121318865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_PARP14_3
RRM_7
RRM_5
DUF7373
PHM7_cyt
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121318865
NCBI-ProteinID:
XP_041111934
LinkDB
All DBs
Position
7:55657303..55663137
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AA seq
375 aa
AA seq
DB search
MAEADRPGKLFVGGLNTETNEKALEQYFTKYGRVVEVLLMKDRETNKSRGFAFVTFENPA
DAKDAAREMNGKTLEGKPIKVEQATKPSFESALARRGPPSLHPRSRGPPRGPRGARGGPT
RGMSSRGPPPMKRGPPIRNGGPPPKRSVPSGPMGRAPMSRERDPYGPPPPRRDAMMSRRD
DYPSPRDDHYSTKDSYSSRDYISSRDSRDYAPPPRDYAYREYPHSSSREEYGGSMSRSYS
DRDGYGGGRESRGYLERPSAGSYREPYDSYGNSRSAPPSRGPPPSYGGSGGSSRYDDYGS
SSRDGYGSRDSYPSSRSDPYSASRGERIGRQERGPAPPLERGYPPRDSFSSSSRGAPRGA
RGGSRSDRGIGRSRY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctgaccgaccagggaaactcttcgttggcggcttgaacaccgagacaaac
gagaaggccctcgaacagtatttcaccaaatacggcagagtagtcgaagtgctgttgatg
aaagaccgtgaaacaaacaaatccagaggttttgcttttgtgacctttgagaacccagct
gatgcaaaggatgctgcaagggaaatgaatggaaagacccttgagggcaaaccgatcaaa
gtagaacaagcaacaaagccgtcatttgaatctgcacttgctaggcgggggccaccatcc
cttcatccaaggagccgcggaccgccgagaggacctagaggcgctcgaggaggacccaca
agaggcatgtcatctagaggtccaccaccaatgaagagagggcctcccattcgcaatggt
ggccctccgcccaagagatctgttccttcaggacctatgggacgggctcccatgtctagg
gaaagggatccttatggtccacctcctccacgcagagacgccatgatgtccagaagagac
gattatccatctccaagagatgaccattatagtaccaaagacagttactcaagtcgggat
tacatcagctccagagattcaagggactatgctccaccaccaagggactacgcttatcgc
gaatacccacattccagttcccgcgaagaatatggaggatctatgtcacggtcatacagt
gaccgtgatggatatgggggtggccgtgagtctcggggctacctggaacgtcccagtgcc
ggttcctatagggagccgtatgacagctacggtaactcgcgcagcgccccaccttcaagg
ggccctccaccatcctacggtggaagcggaggaagcagtcgctatgacgattatggcagc
agttcccgagatggatatggaagtcgtgacagttaccccagcagcagaagcgacccgtac
tcagccagccgtggcgagcgtattggcaggcaggagcgggggccagccccaccactcgag
agaggctaccctcctcgtgattctttcagcagctccagccgtggcgcacctaggggtgcc
cgaggaggaagtagatctgataggggcattggccgaagcagatattaa
DBGET
integrated database retrieval system
