Polyodon spathula (Mississippi paddlefish): 121318881
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Entry
121318881 CDS
T07273
Symbol
gpc4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121318881 (gpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121318881 (gpc4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121318881 (gpc4)
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121318881 (gpc4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121318881 (gpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
121318881
NCBI-ProteinID:
XP_041111975
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All DBs
Position
7:55996884..56026828
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AA seq
553 aa
AA seq
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MAGINVLSLVWASAVLVWVAVCAELKPKTCTEVRLAYGSKGFNYNDVPHQGVNGAQLKVC
PQGFTCCTPEMEEKLSQQSRTDLRAPVTQLSSNLQSTFTQRHRRFDQFFKELLDNAERSL
HDMFTRTYGVMYVQNAELFKQFFQDLKRYYVSGGVDLEQMLSEFWAGLLERMFKLVNVQY
HFTEEYMECVSKHTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLDVIGDVVGKVSVVNA
SPDCVRAAMKMMYCPYCSGQVALKPCPNYCLNVMKGCLANQADLDTEWNNVMDAMLNLAE
RLEGPFNIEAVMDPIDVKISDAIMNMQENSMQVSQKVFQGCGQPRPAVPDRVSRSAPDGG
FNARFRPYNPEERPTTAAGTSLDRLVPDVKKHLKLAKKFWSTLPESVCTGERISAGDECW
NGTAKSRYDSVVMGNGLANQVANPDVEVDITKPDLVIRRQIMVLRLMTNRLKSAHNGHDV
TFFDMSEDGSGEESGSGCEGQHCTSDFVFTPTITKNPPVIARSGEVSGAVGLPLTSFVLL
LGAAALAMLVPRR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatcaacgtgctatcgctggtttgggcttctgcagtgctggtttgggttgcg
gtgtgtgccgagctgaaacccaaaacttgcaccgaagtcaggctcgcctacgggtcgaag
gggtttaattacaatgacgtcccacaccaaggagtgaacggtgcccagttgaaggtgtgc
ccgcagggcttcacgtgctgcacccctgagatggaggagaagctgagccagcagagccgc
actgacctccgagccccagtgacccagctgagctccaacctgcagagcaccttcacacag
cgccaccgccgctttgaccaattcttcaaggagctgctggacaatgccgagcgctccctg
cacgacatgttcacccggacgtacggagtcatgtacgtgcagaacgcagagctcttcaag
cagttcttccaggacctgaagcgctactacgtgagcggcggggtggacctggagcagatg
ctgtccgagttctgggctgggcttctggagcgcatgttcaagctggtcaatgtccagtac
catttcacagaggagtacatggagtgtgtcagcaagcacactgaacagctcaagcccttc
ggagacgtgcctcgcaagctcaaactgcaggtcacgcgcgcctttgtggcggcaaggact
ttcgctcaggggcttgacgtcattggagacgtggtcggcaaagtgtccgtggtgaacgcc
tctccggactgcgtgagagccgccatgaagatgatgtactgtccctactgcagcgggcag
gtggcgctcaaaccctgccccaattactgcctcaacgtgatgaagggatgcctggcgaac
caggccgacctggacacagagtggaacaatgtcatggatgccatgctgaacctggcagag
agactggaaggccccttcaacattgaggctgtgatggaccccattgatgtcaagatctcg
gacgccatcatgaacatgcaagaaaacagcatgcaggtctcccagaaggtgttccagggg
tgtgggcagcctaggcctgctgttccagatcgcgtctcacgctcggctcctgatggcgga
ttcaatgccaggttccgaccctacaacccggaggagaggcccactactgcagcgggcacc
agcctcgacagactggtccctgatgtgaagaagcacctcaagctggcaaagaagttctgg
tccacgctgccggagagtgtgtgcacgggagagcggataagcgcgggagacgagtgctgg
aatggcaccgcaaagagcaggtacgattcggtggtgatgggaaatgggttagccaaccag
gtggccaaccccgatgtggaggttgacatcaccaagccggacttggtgattcgccggcag
ataatggtgctgcgcctgatgaccaacaggctgaagagcgcccacaacgggcatgacgtc
accttctttgacatgagtgaggatggcagtggggaggagagtggcagcgggtgcgagggc
cagcattgtacgtccgatttcgtcttcactcccaccatcaccaagaaccctccagtgatt
gcaagatcgggtgaagtttcgggggcagtcggtctgcctctgaccagctttgtcctgctg
ctgggagctgcagctctggccatgctagtccctcggagataa
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