Polyodon spathula (Mississippi paddlefish): 121318903
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Entry
121318903 CDS
T07273
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121318903
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121318903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
121318903
NCBI-ProteinID:
XP_041112026
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All DBs
Position
7:56368313..56391033
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AA seq
2081 aa
AA seq
DB search
MAAFGMLSCEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAK
NVNFNPSKISSNFSSIIAEKLRCNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTDL
AGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAITETKVKKRHV
IDPCIEWTQIITKYLWEQLQKIAEFYRQSSSQGCGSPLPATPVEVETAMKQWEYNEKLAM
FMFQDGMLDRHEFLTWVLECFEKIRPGEDELLKLLLPLMLQYSGEFVQSAYLSRRLAYFC
TRRLALLLSDGSVGPGPGGHQAHGISAQPGNALPQTPTPQPAGGNQPQTPFSDFYICPQH
RPLVFGLSCMLQSIVLCCPSALVWHYSLMDSRNKTGSPLDLLPIAPSNLPMPGGNTSFTQ
QVRAKVREIEEQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFEKSDFSN
SLDSLYNRIFGAGQSKDGHEMSPDDDAVVTLLCEWAVSCKRSGRHRAMVVAKLLEKRQAE
IEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPTLTEPGNESERVEFSN
LVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSEEPADESDRKEQEAGVGG
KMEDAGLSESMEIDQNSSAIFDDMFSPPMHCESKGSPSPEKPTSEQDGKTLAKDKGPDPA
FPLVYELPRHIQYATHFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITKDILKV
LNRKSTAETGGEEGQKRKRNKPEAFPTAEDIFSKFQHLSHFDQHQVTSQVSRNVLEQITS
FALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGSY
TTGLCLCIVAVLRRYHSCLILNPDQTAQVFDGLRIVVKHGVNPADCSSAERCILAYLYDL
YTSCSHLKSKFGEIFSDFCSKVKNSIYCNIDPSDSNMLWDPEFMIDTIENPSAHNFSHSM
AGKILNDNPANRYSFVCNVLMYVCVGHHDPERVNDIGILCAELTAYCRSLSAEWLGVLKA
LCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLNA
ACSEQDSEPGARLTCRILLHLFKTPQRNPCHQDSSKSDKPSVGIRSSCDRHLLAASQNSI
VVGAVFAVLKAVFMLGDAELKGSGFSHPVGLDDITEDDLCSKKTGGRSVSIETASLDAYA
KYVLKSICQQEWVGERCLKSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEEGDNP
QRQRIKRILQNMDQWTMRQSSLELQLMIKQSTGNELNSLLENIAKATIEVFQKSAEMNSS
NPSGNGSAGPGSIGSAVSNSNNASKLKPVLSSSERSGVWLVAPLIAKLATSVQGHVLKAA
GEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQV
QQIVTNWREDQYQDDCKAKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISS
GTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDR
QSESLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSLFKKEGLQVSTKQKISP
WDVFEGLKHSAPLSWGWFGTVRVDRKVTKFEEQQRLLLYHTHLKPKPRSYYLEPLPLPPE
EEEPPTPVPPEPEKKPIEAVKPEKIAPTNTDSSKKKPSKKKRNQSTSKTEDYGANTQRGL
TYGGGMPPDLVHAQPGHPFNRMGYVQPPMGMYTQNQPLPAGPRLDTTYRPSRTISMGKLM
PNRPPYPGMMPGMPGTMAGMMGLDQQQYKMGPYKQPPMAQGQILRQQLQAKLQSQGMLGQ
QVRQMAPNPPYGGMQPSQNMSQGYTTYGSHMGMQQHPSQTTGMVPPTYSSQPFQGGHPGA
NPAMVDPLRQMQQRPSGYVHQQAPGYGHPIQNTQRFSHPPIQQTPMMPGMAHITNQGVHA
GMRSTQMLAEQQQQQQQQQQQQQQYLRQQQALRVRIPVRFR
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggccgctttcgggatgctaagttgcgaacaccggcccctgaagcggccaagactgggg
ccccccgatgtttatccacaggaccccaagcagaaagaggatgagttgacagcactgaat
gtgaaacaggggttcaataaccagccggcagtttcgggggatgaacatggcagtgcgaaa
aatgtcaactttaacccctccaagatcagttcgaatttcagcagcattattgctgagaag
ctgcggtgcaacacgttccctgacacaggcaagaggaaaccccaggtcaaccagaaggat
aatttctggctggttacagcgaggtcccagagctccatcaacaactggttcacagacctg
gcaggaactaaacccctcacccagcttgctaagaaggtgccgatattcagtaagaaggag
gaggtgttcggctatttggcaaaatacactgtgccagttatgcgtgcggcctggctaatc
aaaatgacgtgtgcatactacgctgccatcactgagaccaaagtgaagaagaggcatgtg
atcgacccctgcatagagtggacacaaataatcaccaagtacctctgggagcagctccag
aaaattgctgagttttaccggcagtcatccagccagggctgtgggtctccacttccggcc
acaccagtggaggtggagactgcaatgaaacagtgggagtacaacgagaaactggccatg
ttcatgttccaggacggcatgctggacagacacgagttcctgacctgggttctcgagtgc
tttgagaagatcaggcctggcgaggacgagctactgaagctgctcctgcccctcatgctg
cagtactctggcgagtttgtgcagtctgcctacctctcgaggcggctggcctatttctgt
actcgccggctagcgttactactgagtgatgggagtgtgggaccaggaccgggagggcac
caggcccacgggatctcagcacagcccgggaacgctctgccacagacgccaacccctcaa
cctgctggggggaaccagccccaaactcccttctccgacttttacatctgcccgcagcat
cggcctctggtcttcggacttagctgcatgttacagagtatcgtgctgtgttgccccagt
gctctggtgtggcactactccctaatggacagcaggaacaagactggctcgcctttggac
ctgctgcccatagcaccatccaacctgcccatgccaggtgggaacacgtcctttacacag
caggtcagagcaaaggtgcgagagattgaggagcagatcaaagagcgtggccaggctgtg
gaagtcaggtggtcgttcgataagtgccaggaaaccacagcagggttcacaattggacgt
gtcttgcacacgctggaggtcctggacagccacagcttcgagaagtctgacttcagcaac
tccctggactccctctacaaccgcatctttggcgcgggccagagcaaggacggtcacgag
atgtcccctgatgatgatgcggtggtcaccctgctgtgcgagtgggcggtgagttgcaag
aggtctgggcggcatcgggccatggtggtagcaaaactcctagagaagaggcaggctgag
atcgaggccgagaggtgtggggagtctgaagttgtggatgagaagggctctgtttcctca
ggatcgctttctgctgctaccctgccggtcttccaggatgtcttgctgcagttcctggac
acgcaggctcccacacttactgagccagggaatgagagtgagcgtgtggagttctcgaac
ttggtgctcctgttctgtgaactcatccggcacgacgttttctcccacaacatctacatg
tgcacgctgatctcgaggggggacctggcctctgactctcaccttccccgcccccgctcc
cccagcgaggagcccgctgacgagtcggaccgcaaggagcaagaggctggggttgggggc
aagatggaggatgctggcctctctgagtcaatggaaattgatcagaactccagcgccatt
ttcgacgatatgttctctcctccgatgcactgtgagtccaagggcagcccctccccagag
aaacccacctcagaacaggatgggaaaactctggccaaggacaagggtcccgacccggca
ttccctctggtgtacgagctgcctcggcacatccagtacgcaacgcacttccccatcccc
caggaggagagtgccagtcatgagtgtaaccaacggttagtggttctatacggtgtgggg
aagcagcgagacgaagcgcggcatgccatcaagaaaatcaccaaagatatcctgaaggtg
ctgaaccggaaaagcacagcagaaactgggggtgaagaaggacagaagcggaagaggaat
aagcccgaagctttccccacggcggaagatatcttctccaaattccagcatctctcccac
ttcgaccagcaccaggtcacctctcaggtgtctcggaatgtcctggaacagatcaccagt
tttgccttagggatgtcataccacctgccactggtccagcacatccagttcatcttcgac
ctcatggaatactccctcaacatcagtggcctcattgactttgccattcagctgctgaac
gagctaagcctggtggaggcggagctgctgctgaagtcctccagcctggttggcagctac
accacggggctgtgcctgtgtattgtggccgtgctccggaggtaccactcctgcctcatt
ctcaaccccgaccagacggcccaggtctttgacgggttgcgcattgtggtgaagcatgga
gtgaaccctgcagactgctcctcggcagagcgctgcatcctggcctacctgtacgacctc
tacacctcctgcagccacctcaagagcaagttcggggagatcttcagtgatttttgctca
aaggtgaagaactccatatactgcaacattgacccttcagactcgaacatgctgtgggac
cccgagttcatgatcgacaccatcgagaatccctctgctcacaacttcagccactccatg
gcaggcaagatcctcaacgacaacccggccaaccgttacagctttgtgtgcaatgtgctc
atgtacgtgtgtgtgggccaccacgacccagagagagtgaatgacattgggatcctgtgt
gcagagctcactgcctactgtcggtccctgagtgcagagtggctgggcgtactcaaggcc
ctctgttgctcctccaacaatggaaactgtggcttcaacgacctgctctgcaacgtggat
gtgagtgatctctctttccatgactccctggcgacctttgttgcaatcttgattgcccgc
cagtgcctgctgttggaggatctggtccgctgtgtggcgattccttcacttctcaatgca
gcctgcagtgagcaggattcggagcccggtgccaggctaacctgcaggattctcctccat
ctcttcaaaaccccgcaacgcaacccctgccatcaggacagcagcaagtcagataagccc
tcagttggaatccggtcctcctgtgatcgccacctactggctgcttcccagaacagcatt
gtggtgggagctgtctttgcagtcctgaaggcagtcttcatgttgggcgatgctgaattg
aagggctcggggttctctcaccctgtggggctggatgacattacggaagatgacctgtgc
tccaagaagacaggtggccgctcggtctctatagaaactgctagcttggatgcgtacgcc
aagtatgtgctgaagagtatctgccagcaggagtgggtgggagaacgctgcctgaagtct
ctctcggaggacagcagtgctctgcaggaccccgtcctcgtcaacatccaggcccagcgc
ctcctgcagctcatctgctacccgcaccggcagctggacagcgaggagggggataacccg
cagagacagaggatcaaacgcatcctgcagaatatggatcagtggaccatgagacaatcc
tctttggaactccagctcatgatcaagcagagcacaggcaatgagttgaactccctgctg
gagaacattgcgaaggcgactattgaagtgttccagaaatcagctgagatgaactccagc
aacccctctgggaacgggtctgcagggccgggcagcatcggcagcgcggtgtccaacagc
aacaacgccagcaagctgaagccagtcctgagctcgtcggagcgctcaggagtttggctg
gtggctcccctcatcgccaagctagccacgtctgtgcagggccatgtgctgaaggccgcg
ggagaggagttggagaaggggcagcacctgggctcctcgtcccgcaaggagagggaccgg
cagaaacagaagagcatgtctctgctgagccagcagcccttcctgtctctggtgctgaca
tgcctgaaagggcaggatgagcagagagaggggctcctcacctccctctacagccaggtt
cagcagattgtcaccaactggcgcgaggaccagtatcaggatgactgtaaagccaaacag
ctgatgcatgaagccttgaaactgcggctcaacctggtgggagggatgtttgatacggtc
caacgcagcacccagcagaccaccgagtgggccgtccttctcctggatatcattagcagc
ggcacggtcgacatgcagtctaacaacgagctgttcaccacagtactggacatgctcagt
gttctcattaatggcacgctggcggctgacatgtccagcatctctcagggcagcatggag
gagaacaagagggcctacatgaacctggtcaagaaactcaggaaagagcttggggacaga
caatcggagagcctggagaaggtgcgtcagctgctccccctccccaaacagacccgggac
gtaatcacctgcgagccgcagggctccctcatcgacaccaaagggaacaagattgccggc
tttgactcgctcttcaagaaggagggtttgcaggtgtcgacgaaacagaagatctccccc
tgggacgtgttcgagggtctgaagcactctgcaccgctgtcctggggctggttcgggacg
gtgcgtgtggaccgcaaggtgaccaagttcgaggagcagcagcgcctcctgctctatcac
acccacctgaagcccaaaccacgcagctactacctggagcccctgcccctgccccccgag
gaggaggagccccctacccccgtcccgcccgagccagagaagaagcccatcgaggctgtc
aagccggagaagatcgcccccaccaacacagactccagcaagaagaaaccgagcaagaag
aagcgcaaccagtccaccagtaagacagaggattatggtgccaacacacaacgtggactg
acctatgggggagggatgccaccagaccttgtgcatgcccagccagggcaccccttcaac
aggatggggtatgtgcaaccccccatggggatgtacacacagaaccagcctctgccagca
ggcccccggttggacacaacgtatcgcccctcccgcaccatttctatggggaagttgatg
ccaaaccgcccgccctaccctgggatgatgccaggcatgccggggacgatggctgggatg
atgggactggatcagcagcagtacaaaatgggaccttacaagcagccccctatggcacag
gggcaaattctgcggcagcaactgcaggctaaactgcagagccagggcatgttggggcag
caggtgcgacagatggctcctaatcccccctatggggggatgcaaccttcacagaatatg
tcccaaggatataccacctatggctctcacatggggatgcagcagcacccctcccagaca
actggaatggttcctcccacttacagcagccagcccttccagggtggacacccaggtgca
aacccagccatggtggacccccttaggcagatgcaacagaggccgagtggctacgttcat
caacaggctccgggttacgggcacccaatccagaacacacagaggttttcccatccgccc
atccagcagacacccatgatgcccggaatggctcacataaccaaccagggcgtacacgca
ggaatgaggtcgacacagatgctggcagagcagcagcagcagcagcagcagcagcagcag
cagcagcaacaatacctgagacagcagcaggctttgagggtgagaatccctgttcgtttt
agataa
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