Polyodon spathula (Mississippi paddlefish): 121318937
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Entry
121318937 CDS
T07273
Name
(RefSeq) stAR-related lipid transfer protein 13-like isoform X1
KO
K20632
deleted in liver cancer protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318937
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121318937
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Motif
Other DBs
NCBI-GeneID:
121318937
NCBI-ProteinID:
XP_041112085
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Position
7:57865105..57902139
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AA seq
1084 aa
AA seq
DB search
MDRRNGQTLWPRSFTVHFRGSAYKALGILRRKLNHRQIAELEATEACDWLQAAGFPQYAQ
LYEDCLFPIDIASVKKDHDFLDRDSLKSLCRRLTILNKCASMKLEVHFQRKQSEDSEEED
LCAISDRWAFQRDSKRWSRLGSFPPPSSHSPEVLHSDMKASASQESVLSDFSDLEGVSVR
ISSSSSSSVGSSGGTSGSRLTMAEPYSSFSSHHLDTTAVSNRSLTENRSYKDLLALKEKP
KRYRSQSFLRKIGSFRRKDKDREAARAKHCDAQSCDFKEGPLQSSMSLLCTTNESLPGLK
QNIPESSQFKRSTKTICRATAGQPASEGSGKQKQKTTSRGIYLEDYEMSLKVPNWTQQLH
RPLDLQKDCVVYLPSDHKPGTFPKSLSIESLCPAANDDLGNWRSGNTSLEISMCSSSESQ
GFGRLRPRRNSCSSMGSIYDNVPEAYGSSEDLFSLGAGGICDLDDILQHVHGLQNTIDLW
SKRVCPELDDLESELPGDPIFPSSVHFEEQSMSDVGTAASDFDSTGNSLNEAEEMEMRER
RDSGVGASLTRPNRKLRWHSFQNSHRPSLTSASLEINRQSAAQLNLLQKFSLLRLTAIME
KFSVPNKQGWSWTVPKFMKRSKVPDYRDKNVFGVPPIINVQRSGQPLPQSIQQAMRYIRS
QCLDQVGIFRKSGVKSRIQMLRKMNETSPDHVSYEGQSAYDVADMLKQYFRDLPEPVFTS
KLTDTFLQIYQCVPKEQRLQAAQAAIVLLPDENREVLQTMLYFLSDIASAQDNQMTPGNL
ALCLAPSIFHLNVSKKESTAPRLIHRRGAAGKPDQKDLNENMAATQGLTHMIIECKKMFQ
IPHDMMLQSRNSYVAADAHPLPLEGLSRSQLGEPRDYRAFLEDSVQGLLRESMEKCKGWL
TTPGPESTELSYKKVGDGHPIRLWKVSTEIEAPPVTVLHRVLRERHLWDDDLLHGRVIEA
LDKNTEIYHYVTDSMAPHPRRDFIVLRKWHSDLPMGACVLVCASVEHDKVQLEGGVRALL
LSSRYLIEPCGMGRSRLTHICRADLRGRSPEWYNKVFGHLCAVEVARIRDSFPVLTARGP
ETKL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaggaacgggcaaacgctttggccgagatcatttactgtccatttcagaggt
tcagcttacaaagcacttgggatattaaggagaaagttaaaccaccggcagattgcagaa
cttgaggctacagaagcttgtgattggcttcaggcagctggatttccgcagtatgcacag
ctctatgaagactgtctgtttcccatcgacatcgcctctgtgaagaaggaccatgatttt
ctggaccgggactcgctgaaatccctttgcaggagactgacaattctgaacaagtgtgcc
tctatgaagctggaagtccatttccagcgcaaacagagcgaagactcagaagaggaggat
ctgtgtgccatcagtgaccgctgggccttccagcgggacagtaagcgatggtccagactg
gggtccttccctcctcccagctctcatagccctgaggtcctccactctgacatgaaagcc
tcagccagccaggagagcgtcctcagcgacttcagcgacctggagggcgtgtctgttcgc
atcagcagcagcagcagcagcagcgtggggagctctggaggaacctcggggagccggctc
actatggcagaaccctactccagcttctcgtcccatcacttggacaccaccgctgtgtcc
aaccgcagcctcacagagaaccgctcctacaaagacctgctggctctcaaggagaagcca
aagaggtacagatctcaaagcttcctgaggaaaatcggatctttcagaagaaaggataag
gacagagaagcagccagagcaaaacactgtgacgcccaaagctgtgacttcaaggaaggg
ccactacagtcttcgatgagcttgctttgcacaaccaacgagagccttccaggcttgaaa
cagaacatacctgaaagctctcagtttaaaagaagtacgaagacaatctgtagagctact
gccggccagcctgcttctgaaggcagtgggaaacagaaacagaaaaccacaagtagaggg
atttacttagaggattatgagatgagcttaaaggttcccaactggacacagcagcttcac
aggccactggatctgcagaaggactgtgttgtttacctccccagcgaccacaagccaggg
accttccccaagtccctctccattgagagcttatgtcccgcagcgaacgatgatctgggg
aactggagatcgggcaacacgtcattagagatctcaatgtgcagcagcagtgaatcgcaa
ggctttggcaggttgcgtccacgcaggaactcgtgcagctccatgggaagcatctatgac
aacgtacccgaagcgtatggcagctcagaggaccttttcagtttaggagctggaggcatt
tgcgacctggacgatatcctgcagcatgttcacgggctccagaacacgatcgatctgtgg
tccaaaagagtttgccccgagctggatgacctggagtctgaactgcccggtgaccccatc
ttcccatccagtgtccatttcgaagagcagtccatgtcggatgtgggaaccgcagctagt
gactttgacagtacaggcaattctttaaacgaagcagaagagatggaaatgagggaacgg
agggattcaggagtgggggcctcgttgaccaggcctaataggaagctgaggtggcacagt
ttccagaactcgcaccgtcccagcctgacctctgcgtctctggagatcaaccggcagtca
gccgctcagcttaacctgctgcagaaattctcactgctgcgactcactgccatcatggag
aagttctctgtgcccaataagcagggctggagctggacggtgccaaagttcatgaagaga
agtaaagttcctgactaccgggacaagaacgtgtttggggttcccccgatcatcaacgtg
cagcggagcgggcagcccctgcctcagagcatccagcaagccatgagatacatccgcagc
cagtgcctggaccaggtcggtatcttccggaagtcaggtgtgaagtctcggatccagatg
ctgaggaagatgaacgagacctcgcccgaccacgtgagttacgaggggcagtctgcctac
gacgtggcggacatgctaaagcagtatttcagggaccttccagagcctgtgttcaccagc
aagctgactgacactttcctccagatctatcagtgtgtcccgaaggagcagcgtttgcag
gctgcacaggcggccatcgtcctgctgccagatgagaaccgggaagtgctgcagacaatg
ctctacttcctgagcgacattgcctctgcccaggacaaccagatgacccccggaaacctg
gccctgtgcctggccccctccatcttccacctcaacgtgtccaagaaagagagcaccgcc
cccagattgatacacaggagaggagctgcagggaagcctgaccagaaggacctgaatgag
aacatggcggccacccagggactcactcacatgatcatcgagtgcaaaaagatgttccag
atcccccatgacatgatgttgcagtcccgaaactcctatgtagccgcagacgcccaccca
cttcccctggaggggctcagcaggagccagctaggtgaacccagggattatcgggccttc
ctggaggacagtgtccagggtctcttacgcgaatcgatggagaagtgtaaaggctggctc
accacaccaggacctgagagcaccgaattatcatacaaaaaggttggggatggacacccc
attcgtctgtggaaggtctccacggaaatcgaggctccgccggtcacagtgctgcacaga
gtgctgagagagcgccacctatgggacgacgatttactgcacggcagggtgattgaggcc
ctggacaagaacactgaaatctatcactacgtcacagacagcatggcacctcatccgaga
agggatttcatcgtgttaaggaagtggcacagtgatcttccgatgggggcgtgtgtgctc
gtgtgcgcctcggtggaacatgacaaggtgcagctggaaggcggcgttcgcgcgctgctc
ctgagctccaggtacctcatcgaaccctgcgggatgggccgctccagactgacccacatc
tgccgtgccgacctcaggggccgctctcctgaatggtataacaaggtgtttggacatctc
tgtgcagtggaggttgctaggatacgagactctttccctgtgttaacagcgcgagggcct
gaaaccaagctgtag
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