Polyodon spathula (Mississippi paddlefish): 121318943
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Entry
121318943 CDS
T07273
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121318943
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121318943
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121318943
04090 CD molecules [BR:
pspa04090
]
121318943
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Tumor necrosis fators
121318943
CD molecules [BR:
pspa04090
]
Proteins
121318943
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TNF
YlqD
Motif
Other DBs
NCBI-GeneID:
121318943
NCBI-ProteinID:
XP_041112095
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Position
7:58624313..58627443
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AA seq
252 aa
AA seq
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MFGSCLEKKSVSKKLVLSQSSLSMIFLMALSCSVFLLHQVSTLREELQELNKEIHMYLNH
EPAAQQHSTVHTRELKLVPSSFEKRQQYQTLNSLIRTRREARGSAKHQSFMQLKAVKDAE
LIQKGDITIIPWAVSVEKGESLATADNKMIVQEDGYYMVYGQVLFLNPGIHDVMGYLIQR
RRSSVAGTEQRYTNLLLCLQEMPKERSTNSCYTAGVVKLDQGDELELVIPDRPNAQISMD
ADSTFFGVIQLM
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcctgtttggaaaagaagtccgtatccaagaagctggtcctctcccagtct
agtttgtcaatgatctttctcatggctttgtcttgcagtgttttcttactgcaccaggtt
agcacactaagagaagaactgcaggaactcaacaaggaaattcacatgtacctaaaccac
gagcctgcagcacagcagcactcaacagtgcatacaagagaactgaaattggtgccaagc
agttttgaaaagaggcagcaatatcagactctgaactccctgataagaacgaggagagaa
gcgagaggttccgcaaaacatcagtcgttcatgcagttgaaagctgtaaaagatgcagag
ctaattcagaaaggtgatataaccatcattccctgggcagttagtgttgaaaagggggaa
agcctggctacagctgataataaaatgattgtacaagaagacggttattacatggtgtat
ggccaggttttgttcctgaatcctgggattcacgatgtaatgggttatcttatccagagg
agaagatccagcgtagctgggacagagcagagatacacaaacctgctgctctgtttgcag
gaaatgccaaaggaaagaagcaccaactcctgctacactgcaggtgtagtgaaactagac
caaggggacgagctggagttggtaatccccgaccgaccgaacgctcaaatctccatggat
gcggactccacattttttggggttatacaactcatgtaa
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