Polyodon spathula (Mississippi paddlefish): 121318955
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Entry
121318955 CDS
T07273
Name
(RefSeq) neuronal PAS domain-containing protein 2-like isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121318955
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121318955
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
TED_2
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
121318955
NCBI-ProteinID:
XP_041112113
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All DBs
Position
7:58888013..58914477
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AA seq
855 aa
AA seq
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MENLAEFGSCCPSRGREWDSSSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTIDFLQKQKEITAQTESCEIKQDWKPSFLSNEEFTQLMLE
ALDGFLIALTTDGNIIYVSDSVSSLIGQLPSDMVDQNILNFLPDLEHGEVYKLLSSHVLL
TDPIAADFLEHETHIEFFCHLARGSIDPKEHTTYEHVKFIGDFKYHNYVPASSCNGFELG
IARTIRSSAEEQVCLVATVRLVTPPFLKDMCNVEEPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHVDDLELLARCHEQLMQFGKGKSCYYRFLTKGQQWIWMQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRRELGLEETASEMASSFIKSHEVYVDIRQCG
NTQKAPRETHREKLGVSQTRSVSSPSSRKSSHTAISDSASNSSLGFTETATPSYQSVSLG
PDTAASRIQASSSQALLSPQNPSDLHPQQHPPPSSCSQLPVMPVFQFPAPLGVMHQLKEQ
LEERTRILQADIKTQQQELHDIKEQLQLVQDSNLQMFMQPPAPLSFSTVQHQGPGRPAHQ
QQSGVVRQAQGLSKQPPALMGSEQYCGPHSSSPHTLTLRESSTASPQVQHRVMLQHASMP
GQTHASLAMPLYSNPMMFSQTNPRPGQISGTQDVGQRHSESDFNQETQLRVLLNQPLQPA
VSESSGSGQSYQCSCAIQQTKYAPDQQMTAPSLPMQPMSCSALIVPSPAFTSPIMIPQNS
FLTHQTQPVYQQQPQAAQHTLQLQQHHHFFQMQPPGSLQSGPHPQQQSTMTYLQQQPQQQ
QLLPQNQTSSLPRPR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttgcagagtttgggagctgctgtccatccagagggagagaatgggactcc
agcagctgtgtcgatgacctgatggatgaagatgagaaggacagggcaaagagggcatca
cgcaacaaatctgagaagaagagacgagaccagttcaatgtgctcatcaaggagctctgc
accatgctccagggtcagggtcacccgcgcaagatggacaagtcaaccatccttcagcgg
accattgacttcctccaaaagcagaaagaaatcacagcgcagaccgagtcgtgtgagatc
aagcaggactggaagccgtcgttcctcagtaatgaggagttcacccagctgatgttggag
gctttggatggttttcttatagcgcttactacagatggaaacattatatatgtatccgac
agtgtttcctcactcattgggcaattaccgtcagatatggtggaccaaaacatcttgaac
tttcttcctgatcttgaacacggggaggtgtacaagctgctatcgtcacacgtgctcctg
acagaccccatcgctgccgatttcctggaacatgagacccatattgaattcttctgtcat
ttagccagaggaagcatcgacccaaaggaacacactacatatgaacatgtgaaattcata
ggagattttaaataccacaactatgtgcctgcatcctcttgtaacggcttcgagctggga
atagcaagaacaatccgctcatctgctgaagagcaggtttgccttgtcgccactgtccgc
ttggtcacgcctccctttttaaaggatatgtgcaatgttgaagagccctgtgatgaattc
acatcacggcacagtttagaatggaaattcctatttctagaccacagggcctctcccatt
ataggttacttacccttcgaggttctgggcacctctggctatgattactatcatgttgat
gacctggagcttctcgctcggtgccacgaacagttgatgcagttcgggaagggaaagtcc
tgctattaccgcttcctcaccaaaggtcagcagtggatttggatgcagactcattactac
atcacctatcaccagtggaactccaagccagagttcatagtgtgcacgcacactgtggtc
agctatgcggaggtccgggcggagcgcaggagagagctgggtcttgaggagacagcatca
gaaatggcttcctccttcattaagagtcacgaggtgtacgtggatatccggcagtgtggg
aacacacagaaagcacccagggagactcacagggagaagctgggggtcagtcagactcgc
tcggtgtcgtcgcccagctcacgcaagtcctcgcacaccgccatctcagactctgcatca
aactcctctctcgggttcacagaaacagccaccccgtcctatcagtctgtgtccctgggg
ccggacacggccgcctcccgaatacaggccagcagctcccaggctttgctgtcgcctcag
aacccctctgatctgcatccccagcagcacccacccccatcctcctgcagccagctccca
gtcatgcccgtgttccagtttcctgcgccgctgggggtgatgcatcagctgaaggagcag
ttggaggagcgcacacggattctgcaggctgacatcaagacccagcagcaggagctgcac
gacatcaaggagcagctgcagctggtgcaggactccaatctgcagatgtttatgcagcca
cctgcccctttgagttttagcactgtacagcaccaaggcccaggaaggcccgctcatcag
cagcagtctggagttgtcaggcaggcccagggcttatccaagcagccccctgccctgatg
ggatcggagcagtactgcggcccacacagctcctcccctcacacgctcacactgagggag
tccagcacagcgtcgccgcaggtccagcacagagtgatgctgcagcacgccagcatgcca
ggacagacacatgccagcctggccatgcctctctacagcaaccccatgatgttttcacag
accaacccccggccaggacagatctcggggacccaggacgtgggccagaggcacagcgag
tcagactttaaccaggaaacacagttacgtgtgctcctgaatcagccgctgcagcccgcg
gtgtcagagagcagcggaagcgggcagtcctaccagtgcagctgtgccatacagcagacc
aaatacgccccggatcagcagatgacggccccctcattacctatgcagccaatgagctgc
agcgctctcatagtgccgtctccagcgttcacatcgcctatcatgattccacagaacagc
tttctcacacaccagacccagcccgtctaccagcagcagccccaagcagcacagcacaca
ctgcagctgcagcagcaccatcacttctttcagatgcagccccctggatctcttcagagt
ggaccgcacccccagcaacagagcaccatgacatacctccagcagcagccccaacagcag
cagctgcttccccagaatcagaccagcagcctgccgcgcccccggtag
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