Polyodon spathula (Mississippi paddlefish): 121318971
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Entry
121318971 CDS
T07273
Name
(RefSeq) synaptic functional regulator FMR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121318971
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121318971
Factors involved in mRNA localization
Other mRNA localization factors
121318971
mRNA cycle factors
Stress granule specific factors
121318971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
Motif
Other DBs
NCBI-GeneID:
121318971
NCBI-ProteinID:
XP_041112143
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Position
7:complement(59547003..59560808)
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AA seq
610 aa
AA seq
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MATVMDELAVEVRGTSGAFYKAFVTDVHDDSVTVTFENNWQPERQIPFSDVRFPPPSGFQ
KDISESDEVEVCAVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATYNEIVTIERLR
PINPNKPATKDTFLKITMDVPDDLRQMCAKESAHKDFKKAVGAFSVTYDSDTNQLVILSI
SEVTTKRATMLSDMHFRSLRTKLSLMMRNEEASRQLESSRQLASRFHEQFVVRDDLMGLA
IGTHGVNIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDAIKVPKYLV
GKVIGKNGKLIQEVVDKSGVVRVRVETENDKKNLQDELLQGMVSFVFVGTKDSISNAQVL
LDYHLNYLKEVDQLRLERLQIDEQLRQIGAGGSRPPASRSDKDKTFSADESVGPARGGKP
FSGRGRGRRGPSYASGTNSEASNASETESDHRDELSDWSLAPADEERDSVPHRGDGRKRG
GGGRGRGGRGRGGYKGNEEMQWNETRQRNPKDPKSRPPEDSLQIRIDSNNERSVHTKAFH
GPFTEGDSNGSNRPRPGRERALKKDKPDTEAGRERVLKKDKPDTEAGRECALKKDKPDTE
SPRVLLNGVS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtcatggatgagttagctgtggaagtccgggggaccagtggagctttttac
aaggcatttgtgacggatgtacatgacgattctgtgacggtaacgtttgagaataattgg
cagccagagagacagattcccttcagcgatgtacgattccctccaccttcgggatttcag
aaagacataagcgaaagcgatgaagtagaggtatgtgctgtttattccagagcaaatgac
aaagagccctgtggttggtggcttgcgaaagtcagaatggtgaagggagagttttatgtt
atagaatatgctgcttgtgacgctacctacaatgaaattgtcacaatagagaggttgcga
cccatcaacccaaacaagccagcaacgaaagacaccttcctcaagatcacaatggacgtg
cccgatgacttgcgccaaatgtgtgcaaaggaatctgcacataaagatttcaaaaaggca
gttggagcattcagtgtaacatacgattcagatacaaatcagctggttattttgtccatc
agtgaagtgacaacaaagcgagcgactatgttaagtgacatgcatttccgaagcctgcgc
acaaagttgtccctaatgatgaggaatgaagaagccagcagacagctagagagctcccgg
cagctggcctcccgtttccacgagcagtttgttgtgcgagacgatctcatgggtctggcc
atcggtactcacggggtcaacatccagcaggccaggaaagtgcctggggtgaccaccatc
gatctggacgaggagacctgcactttccatatctacggagaggaccaagaagcagtaaga
aaagccagaagttatttggaattttctgaagatgcgataaaagtaccaaaatatttagta
ggaaaagttattgggaaaaatggaaaactcattcaggaggtcgtggataaatccggagta
gttcgtgttagagttgaaactgagaatgacaaaaaaaatctacaagatgaattactgcag
ggcatggtatcgtttgtgtttgttggaacaaaggacagcatctccaatgcacaagttctt
ctggactatcacctcaattacttgaaggaggtagaccagctccgtctggagaggttacag
attgatgagcagctgaggcagatcggggcagggggttccaggcccccagcaagccgctcc
gataaagacaagactttcagcgctgacgagagtgtgggtccagcccgcggaggaaagccc
ttcagtgggaggggccgtggtagacgtgggccgagctatgcgtcaggcaccaactctgaa
gcctccaatgcatctgagactgagtctgatcaccgggacgaacttagcgactggtcactg
gcaccagcggacgaggagagagacagcgtccctcaccgtggcgacggccgcaagcgggga
ggagggggcagaggccgagggggccgaggccggggagggtacaaaggaaatgaagaaatg
cagtggaacgaaacgcggcagcgcaaccctaaagaccccaaatctaggcctccagaagac
tctctgcagatcagaattgacagcaacaatgaaaggagtgtgcacactaaagcattccac
ggtcccttcactgagggcgacagcaatggcagcaaccggccgcggccaggcagggagcgc
gctctgaagaaggacaagcccgatacagaggcaggcagggagcgcgttctgaagaaggac
aagcccgacacagaggcaggcagggagtgcgctctgaagaaggacaaacccgacacagag
agcccccgggtgctgctgaatggagtgtcgtag
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