Polyodon spathula (Mississippi paddlefish): 121319128
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Entry
121319128 CDS
T07273
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121319128
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Cadherin related
121319128
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
DUF769
Ribosomal_S28e
Motif
Other DBs
NCBI-GeneID:
121319128
NCBI-ProteinID:
XP_041112245
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All DBs
Position
8:37121405..37132053
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AA seq
464 aa
AA seq
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MYDIVKREQDRKNYQSNLCYGGSDITAAVRENSPNGEFIANLSIIGNPGVNSIRLCLTGD
NADWFFLEGKTIRLNSSSTRVLDREEQGSILVASMTCYENDSIQTTNRIMVEILNENDNR
PEFLPHSIQPLNISELSSVNTIIFTVQARDADHDTIVYIIDTTLPDASYFKIDLPNSGRV
VLAKPLDYETKSQLELIIFAVEMNTDQKYNTSATIQINVLDGDDQYPQFLPCTPWSQDQT
RSVCTNPVYTVNVTEKQQGGSLHFSPGPIYAEDGDKGLRTPVKYTILSGTDNGRFRINNV
TGEVIMTRPVENRLLTPTLRLRIMAFQVDDLKKYTVATALIRVLAVNHFPPQFNQTTYKG
FIMENPGPAALVTTYRNAVLLVQALDRDFREGLNPKIQYSLTPKSNNTRVYQITQEGLLI
AKANQLRPHEKHFLEVIAVDQESGETAKASVDIEVLHNGQEGTT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacattgtaaagagagagcaggatcggaagaattatcaatctaatctgtgttat
ggtggcagtgacatcacagctgctgtgcgagagaacagcccaaatggagaattcattgca
aatctcagcataatagggaaccctggggtgaacagcattcgcctgtgcctaactggagat
aatgctgactggtttttcctagaaggtaaaaccatcaggttaaactcttcttccacaaga
gtactggatcgggaggagcagggttccattttggtggcatccatgacctgttatgaaaat
gattcaattcagactacaaatcgaatcatggttgagatccttaatgaaaacgacaataga
cctgaattccttccacactcaattcagcctctgaacataagtgagctgtcttcagtgaac
actattatatttacggtgcaagctcgagatgcagaccatgatactattgtatatattatt
gataccactttgcctgatgccagctacttcaagatagacttgccaaacagcgggagagtt
gtcttggccaaaccattggattatgaaacaaaatcacaactggaattaatcatttttgct
gtggaaatgaatacagaccaaaagtataatacttcggcgacaatacaaatcaatgtcctg
gatggagatgatcagtatcctcagtttcttccatgcaccccctggtcacaagaccagacc
agatcagtctgcacaaacccagtctatacagtgaatgttacagaaaaacaacagggtggc
tctttacatttttcccctggtccaatttatgcagaggatggcgataaaggtttaaggacc
ccagtaaaatacactattctctcaggcacagataatggcagattcagaataaacaatgtt
accggggaagttattatgacaaggcctgtggaaaatagattactgacaccaacccttagg
cttcgaattatggcattccaggtagacgatctaaaaaaatacacagtggctacagctctg
ataagagtgttagctgtgaatcactttccaccacagtttaaccaaactacatacaagggg
tttatcatggaaaacccaggccctgcagcccttgtaactacatatagaaatgcagttcta
ctggtacaggcccttgatcgagatttcagagaggggttgaatcctaaaatccagtattct
cttacaccaaagtccaacaacactagggtctaccagatcacacaggaaggactgctaatc
gccaaagcaaatcagctccggccacacgagaaacatttcttggaggtaatcgcagtggat
caggaatcaggggaaactgcaaaggcctcagttgatattgaagttctacataatggtcaa
gaaggtacaacgtaa
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