Polyodon spathula (Mississippi paddlefish): 121319147
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Entry
121319147 CDS
T07273
Name
(RefSeq) ras-related protein Rab-21-like
KO
K07890
Ras-related protein Rab-21
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319147
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121319147
04031 GTP-binding proteins [BR:
pspa04031
]
121319147
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
121319147
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121319147
Exosomal proteins of other body fluids (saliva and urine)
121319147
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab20/21/24 [OT]
121319147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
TRAPPC-Trs85
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
121319147
NCBI-ProteinID:
XP_041112262
LinkDB
All DBs
Position
8:complement(47218074..47232100)
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AA seq
218 aa
AA seq
DB search
MAAGGTGGVNKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGG
KRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEI
CLCIVGNKIDLEKERNVSVQEAEGVNPKKHYHTSAKLNKGIEELFLDLCKRMIETAQADE
RAKGNGSSQAGTARRGVQIVDDEPQSAATAGGGCCSSG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggaggaacagggggcgttaataagacgtattcttttaaggtggttttgtta
ggagaaggctgtgtggggaagacatcgttggtgctgcggtactgcgagaacaaattcaac
gacaaacacatcacaacgctgcaggcatccttcttaacaaagaaattgaacatcggaggg
aaaagagttaaccttgcaatatgggatacagcaggtcaagaaaggtttcacgccctgggc
ccaatatattacagagactccaacggagccatattagtgtatgacgtcacagacgaggat
tcctttcagaaggtgaaaaactgggttaaagaattaagaaaaatgttggggaatgaaata
tgtttatgtattgtaggtaacaaaatagatcttgaaaaagaaagaaacgtatccgtacaa
gaagcagaaggagtcaaccccaaaaaacactatcacacttcagccaaactgaacaaagga
attgaagaactttttcttgacctttgtaaaagaatgattgaaacggcacaggcagacgag
cgagcaaaaggtaacggctccagccaagcaggaacagcacgacgaggggtacagatcgtg
gacgatgaaccccagagtgctgccactgcgggtggaggctgctgttcatctggctaa
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