Polyodon spathula (Mississippi paddlefish): 121319163
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Entry
121319163 CDS
T07273
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121319163
Enzymes [BR:
pspa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121319163
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121319163
Prokaryotic type
121319163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
121319163
NCBI-ProteinID:
XP_041112276
LinkDB
All DBs
Position
8:51264244..51291236
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AA seq
457 aa
AA seq
DB search
MVIYEIICVFECVCIPVSLSLSPEVLEDTKEKRTLLLQAVKSLFPGRRFIVAYHAAEKKA
LAAPRKHSWPKSRGNFCHCTPYKENKDTMEAINVLSKFLRIKPNLISYMGTKDKRAITVQ
RIAVQKITAQRLFQLNTCLMNFKLGNFSYQKHPLKLGELQGNHFTVVIRNISGSNEQMEL
AMVSLRETGFINYYGMQRFRTTAVPTYQVASMCVAEMGYLVQCREEWARSQDPEAALRKL
QVKRCVEGQLLRGLSSYGKNNIIAAFAVIPRNNRLMYIHSYQSDVWNNLVSRCIEEFGLK
AVPGDLILRRGEADVSDYSIRDVVMPLPGFDVIYPTHTIGDGYKEMMEADNLDINNMRHK
IRDYSLSGAYRKIITRPQEVSWEVISYDDLKIPLVHTDVEKLERKLPPVCRKEGKYRALR
MEFSLPPSCYATMAICEVLKMDTSIKNQMQLNTVWLH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtcatctacgaaatcatatgtgtctttgagtgtgtctgtattcctgtctctctgtcc
ctctcccctgaggtcttggaggacactaaagagaagcgcaccctactgctccaggcagtg
aagtctctgttccctggacgcaggttcattgtggcctaccatgctgctgagaagaaagca
ctcgcagctcccaggaagcactcatggcccaagagcagagggaatttctgccactgcacc
ccctataaggagaacaaggacaccatggaggccatcaacgtgctctccaagttcctcaga
ataaagccgaacctcatttcctacatgggaaccaaagacaaaagagcaatcaccgtccag
aggattgctgtgcaaaagatcactgctcagagactttttcaactcaacacgtgcctgatg
aacttcaagctagggaacttctcctaccagaaacaccccttgaaactgggggagctgcag
ggaaaccacttcactgtggtgatcaggaatatctccgggtcgaatgaacagatggagcta
gctatggtctcactgcgggagacgggattcatcaattactacggcatgcagcgcttcagg
accactgcggtgccaacctaccaggttgcgagtatgtgtgtagctgagatggggtacctg
gtgcagtgtcgtgaggagtgggctcgctctcaggaccctgaggctgcgctcaggaagctg
caggtgaagcgctgtgtggaggggcagctgctgcgcggactctccagctacgggaagaac
aacatcatcgctgcgttcgccgttatccccaggaacaaccggctgatgtacatccacagc
taccagagcgacgtgtggaacaacctggtgagccggtgcattgaggagttcgggctgaag
gcagtgccgggggacctgatcctgaggagaggtgaggcagatgtgtctgactactccatc
cgtgacgtggtgatgcctctgcctggcttcgatgtcatttaccccacacacacgattggg
gacggttacaaagagatgatggaggcagacaacctggacatcaacaacatgaggcacaag
atccgtgactactccctctccggagcgtaccgcaaaatcatcacccgcccgcaggaggtt
agctgggaggtgatctcatacgatgatctcaagatcccgctggtccacaccgacgttgag
aagctggaaaggaagctgcctcctgtgtgtcgtaaagaagggaagtaccgcgcgctgcgg
atggagttctccctgcccccctcctgctacgccaccatggcaatctgcgaggtgctgaag
atggacacaagcatcaagaaccagatgcagctcaacactgtgtggctgcactga
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