Polyodon spathula (Mississippi paddlefish): 121319203
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Entry
121319203 CDS
T07273
Name
(RefSeq) heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04010
MAPK signaling pathway
pspa04141
Protein processing in endoplasmic reticulum
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121319203
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121319203
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121319203
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121319203
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121319203
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121319203
03009 Ribosome biogenesis [BR:
pspa03009
]
121319203
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121319203
04131 Membrane trafficking [BR:
pspa04131
]
121319203
03051 Proteasome [BR:
pspa03051
]
121319203
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121319203
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121319203
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121319203
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19 complex
121319203
Complex C
Prp19-CDC5 complex
121319203
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121319203
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP70 / DNAK
121319203
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121319203
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
121319203
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121319203
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121319203
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121319203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
121319203
NCBI-ProteinID:
XP_041112337
LinkDB
All DBs
Position
8:complement(3932051..3934738)
Genome browser
AA seq
647 aa
AA seq
DB search
MSAPKGVSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPSNTVFDAKRLIGRKYEDSVVQSDMKHWPFMVVNEAGKPKVQVEYKGENETFNPEE
ISSMVLIKMKEIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGSRGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFIEEFKRKYKKDLGQNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSIT
RARFEEMNSDLFRGTLEPVEKALRDAKMDKSKIQDIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFSTYSDNQPGVLIQVYEGERAMTKDNNHLGKFELLGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDTDKYRAQDEAQREKIAA
KNSLESYAFNMKSSVEEDNMKSKISEDDKKQIIDKCNQAISWLDKNQMADKEEYEHQLKE
LEKVCNPIMSKLYQGGAPGGMPGGSCGSQARAGSGSAAQGPTIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacccaagggagtgtctattggcattgacctgggcaccacctactcctgcgtg
ggggtgttccagcatggcaaagtggagatcatcgccaatgaccagggcaacaggaccacc
cccagctacgtggccttcacggacacagagaggctcattggagatgctgccaagaaccag
gtggccatgaaccccagcaacactgttttcgatgccaagcgactgatcggaaggaaatac
gaagactctgttgtgcagtctgatatgaagcactggccgttcatggtggtgaatgaagca
gggaaacccaaggtacaagtggaatacaaaggggagaacgagaccttcaatccagaggag
atctcctccatggtcctgatcaagatgaaagagattgcagaggcttacctgggccagaaa
gtgtccaacgccgtcatcactgtgcccgcctacttcaacgactcccagcgccaggctacc
aaggatgctggcgtgatcgctggactgaacgtgctgagaattatcaatgagcccacagca
gctgccatcgcctacgggctggacaagggcagcagaggagagcgcaacgtcctgatcttt
gacctgggcggcggcacctttgacgtgtccatcctgaccatcgaggacgggatctttgag
gtgaaggccacggcaggggacacccacctgggcggggaggactttgacaaccgcatggtc
aaccacttcattgaagagttcaagaggaaatacaagaaggacctcggccagaacaagagg
gcggtcaggaggctgaggaccgcgtgtgagagagccaagagaaccctgtcctccagcact
caggccagcattgagattgactctctgtatgaaggcattgacttctacacgtcaatcacg
agggctcgctttgaggagatgaactctgaccttttcagagggactctggagcccgtggag
aaggcactaagggatgccaagatggacaagtctaagatccaagacatagttctggtggga
ggctccactcgcatccccaagatccagaaactcctccaggacttcttcaacggcagggag
ctgaacaagagcatcaaccctgatgaagcggtggcctacggtgcagctgtgcaggcagcc
atcctgatgggcgacacctctgaaaacgtgcaggacctgctgctgctagacgtggccccg
ctgtctttgggcatcgagaccgcaggaggagttatgaccgccctgatcaagcgcaacacc
accatccccaccaagcaaacccagaccttcagcacctactcggacaaccagccgggcgtc
ctcatccaggtgtatgagggagagagggccatgacgaaggacaacaaccatctgggcaag
tttgagctgttgggcatcccccccgccccgcgaggagtgccacagattgaggtgaccttt
gacatcgacgccaacggcatcctgaacgtgtctgcggtggacaagagcaccggcaaagag
aacaagatcaccatcaccaacgacaagggccggctgagcaaagaggagatcgagaggatg
gtgcaggacacagacaagtacagagcccaggacgaggcccagagggagaagatagcggcc
aagaattccctggagtcctacgccttcaacatgaagagcagcgtggaggaggacaacatg
aaatccaagatcagcgaggatgacaagaagcagatcattgacaagtgcaaccaggccatc
tcctggctggacaaaaatcagatggcagacaaggaggagtatgagcaccagctgaaagag
ctggagaaagtatgtaaccccatcatgagcaagctgtaccagggaggggcgccaggaggg
atgccaggaggaagctgtgggtcccaggcacgggcaggctcagggtctgccgcccagggg
cccactattgaggaggtggattaa
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