Polyodon spathula (Mississippi paddlefish): 121319206
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Entry
121319206 CDS
T07273
Name
(RefSeq) heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04010
MAPK signaling pathway
pspa04141
Protein processing in endoplasmic reticulum
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121319206
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121319206
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121319206
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121319206
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121319206
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121319206
03009 Ribosome biogenesis [BR:
pspa03009
]
121319206
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121319206
04131 Membrane trafficking [BR:
pspa04131
]
121319206
03051 Proteasome [BR:
pspa03051
]
121319206
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121319206
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121319206
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121319206
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19 complex
121319206
Complex C
Prp19-CDC5 complex
121319206
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121319206
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP70 / DNAK
121319206
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121319206
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
121319206
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121319206
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121319206
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121319206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
121319206
NCBI-ProteinID:
XP_041112339
LinkDB
All DBs
Position
8:3935990..3939365
Genome browser
AA seq
647 aa
AA seq
DB search
MSAPKGVSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPSNTVFDAKRLIGRKYEDSVVQSDMKHWPFMVVNEAGKPKVQVEYKGENKTFNPEE
ISSMVLIKMKEIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGSRGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFIEEFKRKYKKDLGQNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSIT
RARFEEMNSDLFRGTLEPVEKALRDAKMDKSKIQDIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFSTYSDNQPGVLIQVYEGERAMTKDNNHLGKFELSGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDADKYRAQDEAQREKIAA
KNSLESYAFNMKSSVEEENVKSKISEDDKKQIIDKCNQAISWLDKNQMADKEEYEHQLKE
LEKVCNPIMSKLYQGGAPGGMPGGSCGSQARAGSGSASQGPTIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacccaagggagtgtctattggcattgacctgggcaccacctactcctgcgtg
ggggtgttccagcatggcaaagtggagatcatcgccaatgaccagggcaacaggaccacc
cccagctacgtggccttcacggacacagagaggctcattggagatgctgccaagaaccag
gtggccatgaaccccagcaacactgttttcgatgccaagcgactgatcggaaggaaatac
gaagactctgttgtgcaatctgatatgaagcactggccgttcatggtggtgaatgaagca
gggaaacccaaggtacaagtggaatacaaaggggagaacaagaccttcaatccagaggag
atctcctccatggtcctgatcaagatgaaagaaattgcagaggcttacctgggccagaaa
gtgtccaacgccgtcatcactgtgcccgcctacttcaacgactcccagcgccaggctacc
aaggatgctggcgtgatcgctggactgaacgtgctgagaattatcaatgagcccacagca
gctgccatcgcctacgggctggacaagggcagcagaggagagcgcaacgtcctgatcttt
gacctgggcggcggcacctttgacgtgtccatcctgaccatcgaggacgggatctttgag
gtgaaggccacggcaggggacacccacctgggcggggaggactttgacaaccgcatggtc
aaccacttcattgaagagttcaagaggaaatacaagaaggacctcggccagaacaagagg
gcggtcaggaggctgaggaccgcgtgtgagagagcaaagagaaccctgtcctccagcact
caggccagcattgagattgactctctgtatgaaggtattgacttctacacgtcaatcacg
agggctcgctttgaggagatgaactctgaccttttcagagggactctggagcccgtggag
aaggcactaagggatgccaagatggacaagtctaagatccaagacatagttctggtggga
ggctccactcgcatccccaagatccagaaacttctccaggacttcttcaacggcagggag
ctgaacaagagcatcaaccctgatgaagcggtagcctacggtgcagctgtgcaggcagcc
atcttgatgggcgacacctctgaaaacgtgcaggacctgctgctgctagacgtggccccg
ctgtctttgggcatcgagaccgcaggaggagttatgaccgccctgatcaagcgcaacacc
accattcccaccaagcaaacccagaccttcagcacctactcggacaaccagccgggcgtc
ctcatccaggtgtacgagggagagagggccatgacgaaggacaacaaccatctgggcaag
tttgagctgtcgggcatcccccctgccccgcgaggagtgccacagattgaggtgaccttt
gacatcgacgccaacggcatcctgaacgtgtctgcggtggacaagagcaccggcaaagag
aacaagatcaccatcaccaacgacaagggccggctgagcaaagaggagatcgagaggatg
gtgcaggacgcagacaagtacagagcccaggacgaggcccagagggagaagatagcggcc
aagaattccctggagtcctacgccttcaacatgaagagcagcgtggaggaggagaacgtg
aaatccaagatcagcgaggatgacaagaagcagatcattgacaagtgcaaccaggccatc
tcctggctggacaaaaatcagatggcagacaaggaggagtatgagcaccagctgaaagag
ctggagaaagtgtgtaaccccatcatgagcaagctgtaccagggaggggcgccaggaggg
atgccaggaggaagctgtgggtcccaggcacgggcaggctcagggtctgcctcccagggg
cccaccattgaggaggtggattaa
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