Polyodon spathula (Mississippi paddlefish): 121319230
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Entry
121319230 CDS
T07273
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319230
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121319230
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
121319230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
NeA_P2
Motif
Other DBs
NCBI-GeneID:
121319230
NCBI-ProteinID:
XP_041112377
LinkDB
All DBs
Position
1:44914753..45027717
Genome browser
AA seq
979 aa
AA seq
DB search
MNHEEEAELEEEPSRIRGEGNEAAEAYLEQPSVEEEQHSAAFPVTIPAAQCRRQDITAGR
ENSRRRALQQQQNNNSEEVRVQHQQQQQPPPAARYRRFDASGRVTRVRGQRKPQEDTEVE
QQQPLQRPAAARYRRQTDGEARIRAQQQRQRRQQQQREAEMVEVEQQQPSQPPPPPPPPP
QQPEAEDEQMEEEEGGLGLTRSASTESGFHNHTDRAEGDMGMTSEVEAETALEGEAVEDE
NAYAVHYRPESEEYTESAEAEQHGGPYQPQPQPPPPLNPLPHFHPHEQDEEAMSAAYSAY
VYTQRLFHGNEGEQGDGGGSGVGEGQEPYSEPYADYGLQEHVYEEIGDTPPEGDDPQHRR
SGFRLFERESYRQEALGARLHHYDERSDGESDSPEKEAEFAPYPRMDSYDQEEDIDQIVA
EVKQSMSSQSLDRAADEDRPESEQNSQEHKGKSAGEEEEESSPPKPSATSPTGEQPLQRH
SKEKRDAISLAIKDIKEAIEEVKTRTIRSPYTPDEPKEPIWVMRQDISPTRDCDNQRPLD
GESPDSGSTSPQGAESSITQHLHDGSDNSDSPLNKESRKTLASFPTYVEVPGPCDPEDLI
DGIIFAANYLGSTQLLSDKTPSKSVRMMQAQEAVSRIKMAQTLAKSKKTPEGESQPMTEV
DLFISTQRIKVLNADSQETTMDHPLRTISYIADIGNIVVLMARRKMPRPNSQEDVESTSP
QDEKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQ
DMYNDDLIHFSKSENCKDVYIEKQKGEILGVVIVESGWGSILPTVIIANMMHSGPAEKSG
RVNIGDQIMSINGTSLVGLPLSTCQTIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQ
LGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMK
TMPAAMYRLLTAQEQPVYI
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaggaagaggcagagctggaggaggagcccagccgcatcaggggggagggg
aacgaggccgcggaggcttacctggagcagcccagtgtagaggaggagcagcactctgcc
gccttccctgtgactatccctgcggcccagtgccgcaggcaggacattacagcgggaagg
gagaacagccggagacgagcactccaacagcagcagaacaacaatagtgaggaggttagg
gtacaacatcaacaacaacaacagccaccacctgcagcccgttaccgcaggtttgacgcc
tcaggaagggtgacccgggttcgagggcagcgaaagccacaggaggacacagaggtggag
cagcaacagccgctgcagagaccagcagcagcccgataccgtagacagactgacggggag
gctcggattagagctcagcagcagaggcagaggcggcaacagcagcagagagaggcagag
atggtggaggtagaacagcagcagccttcacaacccccaccaccaccaccaccacctcca
cagcaaccagaggcagaagatgagcagatggaggaggaagaagggggtttggggctcaca
aggtcagccagcactgagagcggcttccacaaccacacagacagagccgagggagacatg
gggatgacctcagaagtggaggcagagacagcactggaaggggaggcggtggaggatgaa
aatgcctacgcagtgcactaccgtccagaatcagaggagtacacagagagtgccgaggca
gagcagcatgggggaccctaccagccccagcctcagccaccaccccctctaaacccactc
ccacactttcaccctcacgaacaggatgaggaggccatgagtgcagcctactcggcttat
gtatacactcagcgtctgtttcatggcaatgaaggggagcagggtgatggagggggtagt
ggtgttggggagggacaggagccctactcagaaccctatgctgactatggtctgcaggag
catgtttatgaggaaattggggacaccccaccagagggggatgatccccaacatcggaga
agcggcttccgtctctttgagcgcgagagctatcggcaagaggcgctgggcgcccggctg
caccactatgacgagcgttcggacggagagtcagatagccctgagaaggaggcagagttt
gcaccctacccccgcatggacagctacgaccaggaggaggacatagatcaaattgtggct
gaggtcaagcagagcatgagctctcagagtctggatcgagctgctgatgaggacaggccc
gagtctgagcagaactcgcaggagcacaaaggcaagtcagcaggggaggaggaggaggag
agcagtcccccaaagccttcagccaccagccctaccggggagcagcccttacagagacac
agcaaggagaaacgagatgccatctctctggctatcaaagacattaaggaagccatcgaa
gaggttaaaacacggaccattcgctctccctacacgccagacgagccaaaggaacccatc
tgggtaatgagacaagacatcagtccgaccagagattgtgacaaccaaaggccactagat
ggagagtctccagactcaggttctacatccccgcaaggggcagaatcctctattacacaa
catctccacgatggcagtgacaactcagactctcctcttaataaagagtcaaggaaaacc
ttggcttcattcccaacttatgttgaagttcctggaccctgtgaccctgaagaccttatt
gatggcatcatctttgcagccaattaccttggttccacccagctgctctcagacaagacg
ccctccaagagcgtgcggatgatgcaggcccaggaagccgtcagcagaatcaagatggcc
cagacattagccaaaagcaagaagactcctgaaggagagtcccagcccatgacagaggtg
gaccttttcatttccactcagagaatcaaagtgctgaatgctgactcacaggaaactacg
atggaccaccccctgagaactatttcctacatcgctgacattgggaacattgtagtgctg
atggctcgccggaaaatgccccgccccaactcccaggaggacgtggagtccacaagtcca
caggatgagaagaagcagtataaaatggtctgccacgtcttcgagtcagaggatgcccag
ctgattgctcagtccattggtcaggcgtttagcgtagcgtaccaggagttccttcgagcc
aatgggattaatccagaggacctgagccaaaaggagtatagcgacctgcttaacacccag
gacatgtacaatgacgacctcatccacttctccaagtctgagaactgcaaagacgtttac
attgagaagcagaagggcgagatcctgggggtggtgattgtggagtctggctggggctct
atcctgcccactgtcattatagccaacatgatgcacagcggccctgcagagaagtctggg
agagtcaacatcggagaccagatcatgtccattaatggaaccagcctggtgggactgcca
ctctcaacttgtcagaccatcataaagggattaaaaaaccagtccagaataaagctgaat
attgtgaggtgtcccccagtaacaacagttctcatcagaagacctgacctgagataccag
ctggggttcagtgtacagaatggaattatctgtagccttatgaggggtggaatagcagag
cgtggtggtgttcgagttggtcaccggatcattgaaatcaatggacagagtgttgtggca
acaccacacgagaagatcgtgcacattctgtcaaatgctgttggagagatccacatgaag
acaatgccagctgccatgtacagacttctgactgcccaggaacagccagtttacatctga
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