Polyodon spathula (Mississippi paddlefish): 121319428
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Entry
121319428 CDS
T07273
Name
(RefSeq) zinc finger and BTB domain-containing protein 5-like
KO
K10492
zinc finger and BTB domain-containing protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121319428
04121 Ubiquitin system [BR:
pspa04121
]
121319428
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121319428
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121319428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
Zf-C2H2_ZNF451_2nd
zf-C2H2_4
BTB_SANBR
BTB_KLHL33
BTB_BTBDG
Motif
Other DBs
NCBI-GeneID:
121319428
NCBI-ProteinID:
XP_041112789
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Position
1:complement(47915483..47948535)
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AA seq
711 aa
AA seq
DB search
MDFPGHFDQIFQQLNYQRLHGQLCDCVIVVGSRHFKAHRSVLAACSTHFRALFTVTEGDT
SMNMIQLDSEVVTAEAFSALIDMMYTSTLMLGESNVMDVLLAASHLHLNAVVKACKHYLT
TRTLPMSPPGSTNNERVQQEQQAASSRLQRSFLLQQLGLSLVSSALGGQNGADETNPIRG
GGAGVVEQRASFPIRRFHKRKPSAAAAAAEDRFRQRLRPSVTAEESMIMSDIGGVVVDTG
AHAREYFSPDSLKLGDGPKLDEGLGSVSSVDNADDSTMMFEQPYGNQEDAQLPSQSDGGS
NTGQQQTRNDQAADDGSFQVHVTPEDGGKDMEARDEKEEEEEQHMHVVVKNEPLSSPEPQ
DEVSDVISQAEGSDHVEQGADKIELSPESSDRSFSDPQSTTDHVGDRRGVGPTSNSNLDG
KQNFSISSFLNKGRAAGDNYSQGTNDNLPNTTSGECRMEGDTAYLLSPKSVNGPSHHHHH
HQHLSGDSNPFSDSSDAHFLRPMQDAMGHGYRGADQFALDFQRSSLGLHSLSRSTKGVEG
GGGGMPANMGFPGYRRIAPKMPVMGASMRMDGTQLQDASSSSSSFGGVGGGSSSHMLLNG
AASSGYDGGQQVAAPPQLTRASADVLSKCKKALSEHNVLVVEGARKYACKICCKTFLTLT
DCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHSKTTCLRWQNSNLPNTLL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatttcccagggcattttgaccagatcttccagcagctgaattatcagcgcctacat
gggcagttgtgtgactgtgtgatcgtagtggggagccgtcacttcaaggcgcaccgctca
gtgctagcagcttgtagcacacacttccgggctctcttcacagtgacagagggagacacc
agcatgaacatgatccagctagacagcgaggtggtgacagccgaggccttctctgctctc
attgatatgatgtatacctccacgctgatgctaggtgagagcaacgtcatggacgtgctg
ctagctgcctcacatctccacctcaacgctgtggtcaaggcctgcaagcactacctgacc
acccgcaccctgcccatgtccccccctggcagcaccaataacgagcgggtccagcaggaa
cagcaggctgccagctcccgactccagcgctccttcctgctgcagcagttgggtctcagc
ctggtcagctcggcgcttggaggacagaatggggctgatgagaccaatccgatccggggt
ggaggagcaggagtggtggaacagcgagcatcctttcccatacggcgttttcacaagagg
aagccctctgctgctgcagctgctgcagaggacaggttcaggcagcggctgaggccttca
gttacagccgaggagtccatgataatgagtgacattggtggtgttgtggtggacacagga
gcccatgctcgtgaatacttttccccggattctctcaagctgggtgatgggccaaaactc
gatgaaggcctgggaagcgtctcatcggtggacaatgcagatgatagcaccatgatgttc
gagcaaccctacggtaaccaagaggatgctcagctgcctagccaatcagatggtggcagt
aacactgggcaacaacagacccggaatgaccaagcagctgatgatggcagctttcaggtt
catgtcacccctgaggatggagggaaggatatggaagcgcgggatgaaaaggaagaggag
gaggagcagcacatgcatgtggtggtgaagaatgaacccctgagctccccggagccccag
gatgaggtcagtgatgtcatctcacaggctgagggcagtgaccatgtggagcagggggct
gacaagatcgagctgagtccagagagcagcgaccgcagcttctcggatcctcagtccaca
actgaccatgtgggggacaggagaggagtaggtcccaccagcaatagcaacctagatggc
aagcagaatttcagtatctccagcttccttaacaagggcagggcagctggggacaactac
agccaaggcactaatgacaatcttcccaacaccaccagtggggagtgccgcatggaaggg
gatacagcctacctcctgagccccaaatctgtcaatgggccttcccaccaccaccaccac
caccagcacctgtcaggggacagcaaccctttcagtgattcttcggacgctcacttcctg
cggccgatgcaagatgcaatgggccatggctaccgcggggctgatcagtttgcattggac
ttccagaggtccagcctgggcctacactccctctccaggtctaccaaaggagtggaagga
ggtggaggtgggatgccagcaaacatgggttttccaggctaccgtcgtatcgcccctaag
atgccagtgatgggtgcctcgatgcgaatggatggtactcagctgcaggatgcgtcatct
tcctcgtcttcctttggaggtgttggtggaggcagcagctcccacatgctgctcaacggg
gcagcttcctcgggttacgatgggggtcagcaggtggcggcccctccccagttgacacgc
gcctctgctgacgtgctgtctaaatgtaagaaagcgctctcggagcacaatgtgttagtg
gtagaaggggcacgcaaatacgcctgcaaaatttgttgcaagactttcctaaccctgaca
gattgcaagaagcacatccgtgtgcacacaggggaaaaaccctacgcttgccttaaatgt
ggcaagcgcttcagtcagtccagccacctctacaagcactcgaagaccacatgcctgcgg
tggcagaacagcaacctgcccaacactctgctctaa
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