Polyodon spathula (Mississippi paddlefish): 121319450
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Entry
121319450 CDS
T07273
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121319450 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121319450 (nelfcd)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
121319450 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
121319450
NCBI-ProteinID:
XP_041112827
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All DBs
Position
8:complement(13221739..13228852)
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AA seq
579 aa
AA seq
DB search
MEEDYYHSSAEWNGQDGSLDDGYVDGEADGKIQDECMQKFSSRDYIMEPSIFTSLKTYFQ
AGGSPERVIQLLSENYTAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKTLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFTKMVCHGEHTYLFAQSMMSILAQE
EQGGSAVRRIAQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETWK
KNKRMNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIKTEGECDPVAEFIAHCKSNFIMMN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagactattatcacagctcggcagagtggaacgggcaagacggatctctggac
gatgggtacgtggacggggaggctgatgggaagattcaggacgaatgtatgcagaagttc
tccagccgggattatatcatggaacccagcatctttacctccttaaagacatacttccag
gctggtgggtccccagaacgtgttatccagcttctgtctgagaactacaccgcagtggca
cagactgtcaacctgctggcagagtggctcattcagatgggagtggagccggcccaggtt
caggagagagtggagaaccacctgaaaaccctgctgataaaacacttcgaccctcagaag
gctgactccatcttcacagtggagggagagacccctgcgtggctggagcagatgattgct
cacacgacctggcgagatctcttctacaagctagctgaagctcacccagactgcttgatg
ttaaacttcactgtcaagctcatctcagacgctgggtaccaaggagaaataaccagcgtc
tccacagcctgccagcagctggaggtgttctccagagtgctgcggacttcgctggccact
ctgctggacggaggagaggagaacctggaaaagaacctcccggagttcacaaagatggtg
tgccacggggaacacacctacctatttgcccagtccatgatgtcaatactggcccaggag
gaacaaggaggctctgcagtgcgcaggatcgctcaggaggtccagaaatctgctcatgaa
agggggcatgatgccagccagatcactctggctctaggaacagccgctgcctaccctcgt
gcgtgccaggcactcggagccatgctgtccaaaggagccctgaacccggctgacatcacc
gtcctcttcaagatgttcaccagcatggaccctccccccgtggagctgatccgggtccca
gccttcctcgatctcttcatgcagtccctcttcaaaccaggtgcgaaaatcaaccaggac
cacaagcacaagtacatccacatcctcgcctacgcagccagtgtggtggagacctggaag
aagaacaaacgaatgaacatcaacaaggacgagctgaagtccacctcgaaggccattgag
acagtccataacctgtgctgcaatgagaacaagggggccacagagctggtggctgagctc
agcacactgtaccagtgcatcaggttcccagtggtggcgatgggcgtgttgaagtgggtt
gactggacagtttccgagcctcgctatttccagctccagacagaccacactcctgtacac
ttggccttgttggatgagatcagtacctgtcaccagctcctgcacccccaggtcctgcag
ctcctcatcaagctctttgagacggagcactcgcagctcgacgtcatggagcagatggag
ctgaagaagaccctgctggacaggatggttcatttgctgagcagaggctacgttctgccg
gtggtcggctatatccgcaagtgcctggagaaactgaacacggacatctctctcatcaga
tactttgtgactgaggtactggatgtgatcgctcctccttatacatcagactttgtgcag
ctgttcctgcccattttagagaacgacagtattgccggcaccattaaaacagagggggag
tgtgatcctgtcgcagagtttatagcacactgtaaatctaacttcatcatgatgaactga
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