Polyodon spathula (Mississippi paddlefish): 121319471
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Entry
121319471 CDS
T07273
Name
(RefSeq) matrilin-4-like isoform X1
KO
K19467
matrilin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121319471
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
121319471
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
Matrilin_ccoil
EGF
hEGF
EGF_3
EGF_LRP2
EGF_MSP1_1
SpoU_sub_bind
Plasmod_Pvs28
HTH_55
Motif
Other DBs
NCBI-GeneID:
121319471
NCBI-ProteinID:
XP_041112856
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All DBs
Position
8:13657336..13670018
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AA seq
619 aa
AA seq
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MKLLFFCAMFMFILVVSLDARPEKLDRKCKTGPLDLVFIIDSSRSVRPFEFETMRKFMID
IIHFLDVGPNATQVGVFQYSSQLQSIFSLKSFSKKADMVKAINEIIPLAQGTMTGLAIQY
AMNVAFSAQEGARSNIPKVAVIVTDGRPQDRVAEVAAQARERGIKIYAVGVQRVDMNSLR
AMASSPLEEHVFLVESFDLIQQFGKQFQDKLCGQDLCSEMHHGCEHVCVSTPGSYHCECN
PGYKLNEDGKSCSAIDLCAEAQHDCEHICVSSPGSYSCRCRAGYYLNQDQKTCTMIDYCS
FGNHSCQHKCVSVLSSYFCRCNEGYTLQDDGKTCQPNDLCNSVDHGCEFKCVSNLGSYHC
VCPEGQSLQEDGKTCSTCRSANIDLVLIIDGSKSVRPQNFELVKKFVNQVVDSLDVSASG
TRVGLVQYSSRVRTEFPLSQYQSAEDIKAAVLGVHYMEKGTMTGLALKHMVENSFSEAEG
ARPLIKNIPRVGLVFTDGRSQDNISEWAKRAKDAGITMYAVGVGKAVEAELREIASEPAD
KHFYYTTDFTAINQIAENLKLNICAEESLGEIEVKDPCACESLLEFQERTMSALEELSQR
LAQMTARLEELENQLVSKK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgttcttttgtgcaatgttcatgttcatcctggtggtgagcctggacgcc
agaccagaaaagctggatcgcaagtgtaagacgggccctctggacctggtcttcatcatt
gacagctccaggagcgtgaggccctttgagtttgagacgatgaggaagttcatgatcgat
atcatccactttctggatgtgggccccaacgccacgcaggttggggtgttccagtactcc
agccaactccaaagcatcttctcactcaagagcttcagcaagaaagctgacatggtgaaa
gccatcaacgagatcatcccactagcccagggcaccatgactggccttgccatccagtac
gccatgaacgtggctttcagcgcacaggagggcgcccgcagtaacatacccaaggtggcg
gtgatcgtgacggatggccggccgcaggaccgcgtggctgaggtggcggctcaggcacgg
gagagaggcatcaagatctacgcggtgggagtgcagagggtcgacatgaactcactgagg
gctatggcctcctcgcccctcgaggagcacgtcttcctggtcgagtcctttgatctcatc
cagcagtttggaaagcagttccaagacaagctctgtggtcaggatctgtgcagtgagatg
catcacggctgtgagcatgtctgtgtcagcactcctggatcatatcactgtgaatgtaac
cctggatataaactcaacgaggacggcaagtcatgctcagctattgacctctgcgcagaa
gcacagcatgactgtgaacacatttgtgtgagctcccctggttcatactcctgccgctgc
agagccggttactacctcaaccaggaccagaagacatgcacaatgattgactactgttcg
tttgggaaccacagctgtcagcacaagtgtgtcagtgttctaagcagctatttctgtcgc
tgtaatgaaggatacacacttcaggatgatgggaaaacctgccaacccaatgacctttgc
aactcagtggaccatggctgtgagttcaagtgtgtcagcaaccttggttcctaccactgc
gtctgcccagagggacagtccctgcaggaagatggcaagacctgcagcacctgcagatcc
gctaacatcgatttagttctcattatcgacggctccaagagcgtgcggccacagaacttc
gagctggtcaagaagtttgtgaaccaggtggtggactccctggacgtgtcggccagcggg
acccgggtggggctggtgcagtactcgagtcgtgtgcgtacagagttccccctcagccag
taccagagcgcggaggacatcaaggcagccgtcctgggcgtgcattacatggagaagggc
accatgacggggctggccctgaagcacatggtggagaacagcttctcggaggccgaaggg
gctagacccctcatcaagaacatccccagagtgggcctggtcttcaccgacgggcgttcc
caggacaacatctctgagtgggccaaacgggccaaagatgcaggcatcaccatgtacgct
gtgggggtcgggaaagcggtcgaggcggagcttcgggagatcgcctccgaacccgcagac
aaacatttctactacacaacggacttcacagccatcaaccagatcgcagaaaacctgaaa
ctcaacatctgtgcagaagagagtctcggggaaatcgaggtgaaagacccgtgtgcctgt
gagagcctgttggagttccaggaaagaaccatgtctgctctggaggagctctctcaaaga
cttgctcagatgacagccagactggaagaattggaaaaccagcttgtctcgaagaaatga
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