Polyodon spathula (Mississippi paddlefish): 121319505
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Entry
121319505 CDS
T07273
Name
(RefSeq) TBC1 domain family member 30-like isoform X1
KO
K24800
TBC1 domain family member 30
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319505
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121319505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF4682
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121319505
NCBI-ProteinID:
XP_041112927
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All DBs
Position
8:complement(15443533..15484268)
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AA seq
950 aa
AA seq
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MASHGHLRQNELLEIDISCDDNCFAAKNDVFVNSGASYDGFPAFQQWIPAASPPTAFGES
EEGASLFTQSAPSTRHPTQNQEPEDTVRLSSDSDDSCDIRHRGAGNPLAPRSSIVDYLLI
ELYDTYTCNSRKSADSVDSSTEASSSDAFLGRSNTESNFLQELQEKQTKRHQMQYLAQKD
IDELKRIIQEVNYRIGVQSAKLVRQVKRKDRLANKVQKNNDIITACLQAVSQKRRVDTKL
KFTIEPLLGKNGFQQWYDALKAVARLPTGIPKEWRKRVWLTLADQYLHSISIDWDKTMRF
AFNDRSNPDDDTMGIQIVKDLHRTGCSSYCGQEAEQDRVGLKRVLLAYARWNKAVGYCQG
FNVLAALILEVVEGNEGEALKVMIYLIDKVLPDSYFANNLRALSVDMAVFRDLLRIKLPE
LSQHLDHLQKAANRASGGSYEPPLTNVFTMQWFLTMFATCLPNHTVLKIWDSVFFEGSEV
LLRVALAIWAKLGERIENCQSSDEFYSTMGCLAQEMLEHNLINSSDLMQMVYSMAVFPFP
HLAELREKYTYNITPFPAPGKLGKSRDSDEEIDIDDEDSLVNAVGCLGPFSGLLAPELQR
YQKHLTDHKEVQSLRSSNIAELSPGAIDSSRSEYQATFNSMMMERMTTDISALKRQYSRI
KRRQQQQQANLIYIKAGTEEEPNPGIMSDPSSQSRNGIENKGPTTSLLTSQIHHSPVMNH
LLLGKKLKPTQKSPRNNTVHIPGAKPAPLPQEDIKTKLNSPWRTHVRVHRKNLARARGQL
NYGDTIGLIEEPGDQSPKPGGDLPHGGSEEGSREKEEGEEREEKEEEEEKERPVEKADGQ
SPLPAYQDANITEVQHQLEALELSPATADLEQPRCQRKVSDSSSSESGGYSTTKTQPFCP
FPSVKPPRKSAAARNLGLYGPTSRTPTVHFPHLSKNVNQISNGGSGTKKR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcatggacacctcagacagaatgaacttttggaaatcgacatttcttgcgat
gacaactgctttgctgcgaaaaacgacgtcttcgtcaactccggtgcgtcttatgacggg
ttccctgcgtttcagcagtggatacctgccgcttctccacctactgcgtttggagagtcg
gaggagggtgcgagtctgttcacccagagcgctccatcaacgcggcatccgacacagaac
caagaaccggaggatacagttcgacttagcagcgacagtgacgattcctgtgacatcaga
cacagaggtgcaggaaacccgcttgccccaagatcatctattgtggattatctcctgatc
gagctgtatgacacctatacttgtaacagcaggaagagtgctgacagcgtggatagctcc
accgaggcgtccagttcggatgctttccttggccggagcaatacagagtcaaacttcctg
caagaactacaagagaagcagaccaaacgacaccagatgcagtatctggctcaaaaagat
attgacgagctgaagaggattatacaggaagtgaactatcggatcggggtacagtctgca
aaattggtccgccaggtgaagaggaaggaccggctagccaacaaagtgcagaagaacaat
gacatcataaccgcctgcttgcaagctgtgtcacagaaaagacgagttgatactaaactg
aagtttactattgaacctttactgggaaaaaatggattccagcagtggtacgatgctctc
aaagctgtggccaggctgcccactggaatccccaaagagtggaggaaaagggtttggttg
acacttgcggatcagtatctccacagcatctccatagactgggacaagactatgcgcttt
gccttcaacgaccgcagcaatcctgatgatgacaccatgggaatacaaatagtcaaggac
ctgcatcggacaggctgcagctcgtactgcgggcaagaggctgagcaggaccgcgtgggg
ctcaagagggtgctgctggcctacgctcgctggaacaaggcggtgggatactgccagggc
ttcaacgtgcttgccgcgctcatcctagaggtcgtggagggcaacgagggagaggcgctt
aaggttatgatctacctgattgacaaggtgctccctgacagctactttgccaataacctg
cgcgctttatcagtagacatggccgtgttcagagacctgctgaggatcaagcttccggaa
ctctctcagcatctggatcatctgcagaaagcagccaatcgagcaagcggaggcagctat
gagccacccctcaccaatgtcttcaccatgcagtggttcctcaccatgtttgccacctgt
ctcccaaaccacaccgtgctgaagatctgggactctgtgttctttgaagggtcagaggtg
ctgctgagggttgccctggccatctgggcaaagctgggagaacggattgagaactgccag
agttcggatgagttctacagcacaatggggtgtctggcccaggagatgctggaacacaac
cttatcaactccagtgatctcatgcagatggtgtactccatggctgtgttcccattccct
cacctggccgagctgcgagagaagtacacctacaacatcacccccttcccagcccctggg
aagctgggtaagagccgagacagtgacgaggagatcgatatcgacgatgaggattcacta
gtcaacgctgtggggtgtcttgggccctttagtggcctgctggccccggagctgcagaga
taccagaagcatctgacagatcacaaggaggtacagagcctgcgttccagtaacattgca
gagctgagccccggagccattgattcgagccgcagtgaataccaagccaccttcaacagc
atgatgatggagaggatgacgacagacatcagtgctctcaagagacagtactcccggatc
aaacgaaggcagcagcagcagcaggctaacctcatctatatcaaagcaggaacagaggag
gagcctaaccctgggatcatgagtgatcctagcagccagtcccggaatggcatagaaaac
aagggacccaccaccagcctcctcacatctcagatccatcattccccggtcatgaaccac
ctcctcctgggcaaaaagctgaagccgacccagaaaagcccccggaacaacactgtgcac
atccctggagccaaaccagcccctctgccccaggaagacataaagaccaagctcaactcc
ccctggcgcacacacgtccgagtccatcgcaaaaacctggccagagcccggggccagcta
aattacggggacaccatcggactgatcgaggagccaggggatcagagccctaaaccagga
ggggatttaccacatggaggctctgaggaggggagtagagagaaggaggagggagaggag
agagaggagaaggaggaggaagaggagaaggaaaggccggttgagaaagccgacggtcag
tccccattgccagcttaccaggacgccaacatcacagaggttcagcaccagctggaagct
ctggaactcagccccgccaccgctgatctggagcagccccggtgccaaaggaaagtgtcc
gactcttccagctcagagagcgggggctacagcaccaccaagacccagcccttctgccct
ttccccagtgtcaagccgcccaggaagtcagccgcggccaggaacttaggactctacggg
cccacgtcccggactcccaccgtgcacttccctcacttgagcaaaaatgtcaaccagatc
tccaacggaggcagcggcaccaagaagcggtga
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