Polyodon spathula (Mississippi paddlefish): 121319514
Help
Entry
121319514 CDS
T07273
Name
(RefSeq) nuclear pore complex protein Nup50-like isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121319514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121319514
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121319514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
121319514
NCBI-ProteinID:
XP_041112949
LinkDB
All DBs
Position
8:15928064..15958359
Genome browser
AA seq
479 aa
AA seq
DB search
MAKRVADKELTDRNWDQEEESEEAGVFSTASEDVMKSRPIKKAKRRNVGTEADSGGTFKG
FKGFSLCGAGSGGAGGGAAGFGNGSGFKPLLSLANGSSGLSSTPSFTGFNAASETKTISG
SLTFNGPASSQLQKSDVSTESNGVSQSSSAPSSTQNKSHSSREYNRQLASLNCSLRDWVT
KHVNGNPLCDLSPIFSDYKKHLASIEQKHGGSSDSGSESDASSRQSFSLPTLSSSKLQQG
AATALFTFSSDQKESTTSEKRAGSAASAAPATNVTFSFGKKVDSSVLGSLSTSSTAAAPT
FSFSSQGTSSLFGSQGKPPATSTFSFGLSAPQTTIGNGNTPKGEEKGNEEETEEPPKPVV
NEVKEDDAFYSKKCKLFYKKENEFKEKGVGTLHLKQVSEQKTQLLVRADTNLGNILLNIL
VQSSMPCTRMGKNNVMVVCVPNPPVDEKSPTTPVPMLIRVKTAQDADELHKIIMEKKAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagggttgctgacaaggaactcactgacaggaactgggatcaggaagaagaa
agcgaagaggctggtgttttttctacagcaagtgaagatgtcatgaaaagcagacctatc
aaaaaagcaaagcgaagaaatgtaggaactgaggctgacagtggcggaacctttaagggg
tttaaaggcttctctctgtgtggagcaggctctgggggagctggaggaggcgctgcaggc
ttcggaaatggttctggatttaaaccactgctaagcctggccaatggaagcagcggttta
tcaagcacaccctcgtttactgggttcaacgctgcctccgaaacaaagaccatatctggc
tcattaacatttaacggccctgcctccagccagcttcagaagagtgatgtcagtacagaa
tctaatggtgtgagtcagtccagctctgcccctagctccactcagaataaaagccacagc
agtcgagaatataacagacagctagctagcctgaactgctctctgcgggactgggtcacg
aagcacgtcaatggcaaccccctgtgtgacctcagtcctatattcagtgattacaagaag
catttagccagcattgagcagaaacacggaggcagctctgacagtggctctgagagcgac
gccagcagcagacagtctttctctcttccgacgctcagctcttcaaagcttcagcagggt
gcagcaacagcattgttcacattcagcagcgaccaaaaggagagcaccacttcagagaag
agggcaggctctgctgcttcagcagctcccgccaccaatgtcacgtttagttttgggaag
aaagtggacagctctgtcttgggatccctgtctaccagtagcacagcagcagcacctaca
ttttccttttcaagccaaggcacaagttctttatttggaagccaaggaaaacctccagcc
acctccactttctcttttggtttgtcagcacctcaaacaactattggaaatggaaataca
ccaaaaggagaggaaaagggtaatgaagaggagactgaagagcctccaaaacctgttgtc
aatgaagtgaaggaggatgatgcgttttattctaaaaaatgtaagctgttctacaagaaa
gaaaatgaatttaaagagaagggtgtgggtacgttgcatctgaaacaagtatctgaacaa
aagacccagctgttggtgagagcggacaccaatttagggaacatcttgctaaacattctg
gtgcagtcttcaatgccctgcacgaggatgggaaagaacaacgtcatggtagtgtgtgtc
cccaaccccccagtggatgagaagagcccgaccacacccgtcccaatgttaatccgggtg
aaaactgcacaggatgccgacgagctgcacaaaatcataatggaaaagaaggctgcgtaa
DBGET
integrated database retrieval system
