Polyodon spathula (Mississippi paddlefish): 121319545
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Entry
121319545 CDS
T07273
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4-like isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121319545
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121319545
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GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
IQ_SEC7_PH
RHG20_PH
PH_13
IBR
zf-RING_UBOX
C1_1
Motif
Other DBs
NCBI-GeneID:
121319545
NCBI-ProteinID:
XP_041113033
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All DBs
Position
8:complement(17985565..18117579)
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AA seq
916 aa
AA seq
DB search
MDFRRAAFRRKDNTWAQHSQDVLSQVGHSKERVLEKKGKQHCFSSPPQAPDEGACVVLKV
SQTKVGSSPKSPLPEHKPATPNSWITHSAGRRDASRINRGSPGSRLACQTSSPKPPVPPK
PSALQSPGTGLANQNSSSKAPRSERGRMEETPPPQGGPRGKVSHLISHFEGSSPCEVRKD
GTPAANTPKGLVKQHSATSKSWLSSHCPRQKTDPARCNHSTDAASEPQDSQKHTANGVVA
QMEVTDKEEMPPSSFERPGQQDSTTVDSALVNGDRGDLSTQTTNACKGQAKNSISRTPDS
RAVALPDTDPGVCVDGTSTDGSEPELEKSEETKNEQNNKKADTMEITETNEQKIYKIARE
LLQTERAYVTRVNLLDQVFCAKLMEEANKGTFPVDVVKNIFSNISSINTFHGQFLLPELE
KRMGEWTSTPRLGDILQKLTPFLKMYGEYVKNFEQAMELLKIWTDRSPQFKTIIQDIQKQ
EVCGSLTLQHHMLEPVQRVPRYEMLLKDYLKKLPQESSDRKDAEKSLEIIATAATHSNSA
IRKSENLKKLLEVYEMLGDEEDIVNPSNELIKEGQIQKLAARNTSAQERYLFLFNNMLLY
CVPKFSLVGQKFTIRNRVGIDGMKVLETLNEDYPHTFQVSGKERTLELQASSEQDKIDWI
KAFQKTIDIFNQKNETFKMAIAKEQEEHPLEVSSAELGKRAPRWIRDNEVTMCMKCKEPF
NALTRRRHHCRACGYVVCWKCSDHKAPLEYDNSKINKVCKDCYFILMGRSDSEERNDSKK
KGILEIEAAEVSGNSIICGFLQYLEKTKQWQKAWCVIPKNEALVLYLYGAPQDVKAQATI
PLLGYTVEESQRSGDLPHSFKLTQSKSVHGFSAESEELKNKWLKVIKMAVKGDFTEPEPE
PSADPAASQDSPPDSL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagaagggctgcattcagaaggaaagataatacctgggcgcaacattcccaa
gatgtgttgtcgcaggtgggacattcgaaggagcgtgtgttggaaaagaaaggtaaacag
cactgtttcagctcgcctccccaggcccccgatgaaggagcctgtgtggttttgaaagtc
tctcaaacaaaagttggcagcagtccgaaatctcctttaccggaacataagccggccacc
ccaaactcctggataactcacagtgccggccgcagagatgcttcacggataaatcgagga
agtccaggcagcaggcttgcatgccagacatccagccccaagcctcccgtgcctccaaag
ccctcagccctccagagtccggggacgggactggcgaaccagaacagcagcagcaaagct
ccccgaagcgagagaggccggatggaggagacgccaccgccacagggggggcccaggggc
aaggtgtcccatctcatcagtcactttgaaggaagcagcccttgcgaagtgaggaaagat
ggcactccagctgcaaacactcctaaaggtctcgtgaagcaacatagcgccacctccaaa
tcttggctctcatcgcactgccccagacagaagacagatcctgcgaggtgtaaccacagc
acagatgcagcctcggagccccaggattcacagaaacacacggccaatggagtggtagca
cagatggaggtgacagataaagaggagatgcccccgtcctcattcgagagaccaggtcag
caagacagcaccacagtggacagtgctttagtgaatggagacagaggggacttatcaaca
caaactacaaacgcctgcaaaggtcaggctaaaaatagcatcagcaggactccagacagc
cgggctgtagcccttccagatacagacccgggagtgtgtgtggatgggaccagcacagat
ggttcagaaccagagctggagaaaagtgaggaaactaaaaatgagcaaaataacaagaaa
gcggataccatggaaatcacggaaacaaatgaacagaaaatttacaagattgccagagaa
cttctacaaacagaaagagcttacgtcacccgggtaaacctcctagaccaggtattttgt
gccaaactgatggaagaagccaacaagggtacattcccagttgacgtggtaaaaaacatc
ttctccaacatctcctccatcaacaccttccatgggcagtttctgttaccggagctggag
aagcggatgggagaatggacctcgacgccgcggctaggagacatccttcagaagctgacc
ccctttttgaagatgtacggagaatatgtgaagaactttgagcaggccatggagctgctg
aagatctggacagacaggtctccgcagttcaaaaccatcatccaggacattcagaagcag
gaggtgtgtgggagtctgactctgcagcaccacatgttggagccggtgcagagagtgccg
cgctacgagatgctgctcaaggactacctgaagaagctgcctcaggagtcctcggaccgc
aaggacgcagagaagtcgcttgaaattattgctactgctgccacgcactcaaatagcgca
attcgaaaatcagagaatctgaagaagcttctggaggtgtacgagatgctgggtgatgag
gaggacatagtcaacccttccaatgagttgattaaagaaggacagatccagaagcttgca
gcccgcaacacctccgcccaggaacgatacctgttcttgtttaacaacatgttgctgtac
tgtgtaccaaagttcagcttagtgggacagaagttcaccatccggaacagggtgggcatt
gatggcatgaaggtgctggagaccctgaatgaagactatccgcacaccttccaggtgtct
gggaaggagaggacactggagctccaggccagctctgaacaagacaaaatcgactggata
aaggccttccagaaaacaatagatatatttaatcaaaagaatgagaccttcaaaatggcc
atagcaaaggaacaggaggagcaccctcttgaagtttcgtctgcagagctggggaaaaga
gccccgcgctggatacgagacaacgaagtgaccatgtgtatgaagtgcaaggagcccttc
aacgcactgaccaggaggaggcatcactgcagagcatgtggatacgttgtgtgctggaaa
tgctcagaccacaaagctccgttggagtacgacaacagtaaaatcaacaaagtttgcaaa
gactgctacttcattttaatgggacgctccgacagcgaggagagaaatgacagtaagaag
aaaggaattttggagattgaggctgctgaagtctctggaaacagcattatctgtggattc
ctgcagtatttagagaagacaaaacagtggcagaaagcttggtgtgtcatccccaaaaac
gaagcgctggttttgtatttgtacggagccccacaggatgtgaaagcccaggcgacgatt
cctctgctggggtacacggtggaggagagccagcgcagcggggacctgccgcacagtttc
aaactgacccagtccaagtctgtgcacggcttctcagcggagagcgaggagctcaaaaac
aagtggctgaaggtcatcaagatggcggtgaagggggacttcaccgagccagagcccgaa
cccagcgcagaccctgcagcctcacaggacagcccgccagacagtctctga
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