Polyodon spathula (Mississippi paddlefish): 121319581
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Entry
121319581 CDS
T07273
Name
(RefSeq) glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121319581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121319581
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121319581
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
121319581
NCBI-ProteinID:
XP_041113098
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All DBs
Position
1:complement(51816560..52420325)
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AA seq
1007 aa
AA seq
DB search
MEVFPVIFIMPIFWTVTWDSVAADSIIHIGAIFDESAKKDDEVFRLAVADLNLNEEILST
EKITFSVTFVDENNPFQAVQEACELMNHGILALVSSIGCMSAGSIQSLADAMHIPHLFIQ
RAPAGTPRSSCSIIHRLTNEDYTLFVRPPVYLNEVILRVVAEYAWQKFIIFYDTEYDIRG
IQDFLDKVSQQGMDVALQKVENNINKMITGMFTTMRIEELNRYRDTLRRAILFMSPSTAK
AFISEVVETNLVAFDCHWIIINEEVTDLDVQELVRRSIGRLTIIRQTFPMPQNTSQRCNR
GNHRISTSLCDQKDPYAQNMEITNRYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNS
KPWQGGRSMLDTVKKGGVSGLTSFLELNDNGVNPNIHFEILGTNYGEDLGRGIRKLGSWN
PVTGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPNKYRGFSIDVLDALSS
YLGFKYEIYVAPDHKYGSPQADGAWNGLIGELVFKRADVGISALTITPDRENVVDFTTRY
LDYSVGVLLKKAERTVDMFACLEPFDLSLWGCIAGTVLLVGILVYLLNWFNPPRLQMGSM
TSTTLYNSMWFVYGSFVQQGGEVPYTTLAARMMMGVWWLFALIVISSYTANLAAFLTITR
IGNSIQSLQDLSKQTDIPYGTVLDSAVYDHVRTKGMNPFERDSMYAQMWKMINRTSSIEN
NVEESQEGIRRVRYGNFAFIWDAAVLEYVAINDADCSFYTVWNRVADRGYGIALQHGSPY
RDIFSQRILELQQNGDMDVLKHKWWPKDSQCDLYSSVSTMQKGSALDIKSFAGVFCVLAG
GMVLSCFIAMLETWWNKTKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDDSPHKQFSTSSI
DLTPLDIDSLPTRQALEQISDFRNTHITTTTFIPEQIQTLSRSLSAKAASGFTFGGVQDH
RTGPFRQRAPNGGFFRSPIKTMSTIPYQQTSSTGFNFGNDPDRGTSI
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttttccagtgatcttcattatgccaatcttctggactgtaacttgggactcc
gtggctgctgattctattatacatattggggcgatttttgatgaatctgccaaaaaggat
gatgaagtgtttcgcttggcggtggctgacctcaacctgaacgaggaaatcttatcaacg
gagaaaatcactttttctgtgacatttgtggatgaaaacaacccttttcaggctgtacag
gaagcttgtgagctcatgaatcacgggatcttagcactggtcagctccatcggctgcatg
tcagcaggatctatacagtccttggcagatgccatgcacatcccccacctcttcattcag
cgtgccccagccgggacgccccgctccagctgcagcatcatccaccgtctaacaaatgaa
gactacaccctgttcgtgcgtccgccagtgtacctcaatgaggtcattctcagagtcgtt
gcagaatatgcctggcagaagttcatcatcttttatgacacggaatatgatatccgaggt
atccaggatttcttggacaaggtctcccaacagggaatggatgtcgcgctccagaaagta
gaaaacaacatcaacaagatgataacagggatgtttactaccatgcgaatcgaagaactg
aatcgttacagggacacattgcgccgggccatcctcttcatgagcccatccactgcaaag
gcctttatctctgaggtcgttgaaaccaaccttgtggcctttgactgccattggatcatc
ataaatgaggaagtaactgacttggatgtgcaagagctggtgagaaggtccatagggagg
ctaacaattatcagacagacatttcctatgccacagaacacgagtcagcggtgtaaccga
ggcaaccacagaatatcaacttcattgtgtgaccaaaaggatccttatgcccaaaatatg
gagattacaaaccgatacatctatgacacagtgctgctgttggctaatgccttccataaa
aagctggaggatcggaaatggcacagcatggcaagcctgagttgtatccggaagaattcc
aaaccatggcaaggaggacgttcaatgttagacacggtcaagaagggtggagtcagtggt
ttaacaagctttctagaattaaatgacaacggagtgaatccgaacatccattttgaaatt
ctggggacaaactatggagaggaccttggtagaggtattcgcaagcttggtagttggaat
ccagtcactggcctgaatgggacactcacagacaggaaactggaaaacaacatgagggga
gtggtgctgcgtgtggtgacagtgctggaggagccttttgtgatggtgtctgaaaatgtc
ctggggaaaccaaacaaatacagaggcttctctattgatgtcctggatgctttgtcgagt
tacctggggtttaaatatgaaatctacgtggccccagatcataaatatggaagtccacag
gcagatggggcctggaatggcctgataggagagttggttttcaagagagctgatgtaggg
atttcagctttaaccattaccccagaccgggaaaatgtggttgactttacaacccgctac
ttggattactccgtgggggtgctgttgaagaaagctgaaaggacagtagacatgtttgcc
tgcttggaaccctttgatctctctctgtggggctgtatagctggcacagtcctgctggta
ggaatattggtctacctactgaactggttcaaccctcctcgactgcagatgggctcaatg
acatccaccactctctataactccatgtggtttgtctatggctcttttgttcaacaaggg
ggtgaggttccctacaccacactggcagctcgaatgatgatgggggtctggtggctgttt
gctttgattgttatctcttcatacactgctaacctggcagcttttctcacaatcacccgc
attggaaactctatacagtctctacaggacctctctaagcagacagacattccgtacggc
acagtgctggactctgcagtgtacgaccacgtgaggacgaaaggcatgaatccttttgag
agagacagcatgtacgcccagatgtggaagatgatcaaccgaaccagcagcattgagaac
aacgtcgaggaatcccaggagggcattcggagggtgagatatggaaacttcgcctttata
tgggatgcagcagttttggaatatgtggccatcaatgatgcagactgctctttttacaca
gtgtggaatagagtggctgacagagggtatggaattgccctccaacatggcagtccctat
agagatatattttctcaaagaatattggaactccagcaaaatggggacatggatgttctg
aagcacaaatggtggccaaaagacagtcaatgtgacctttactcttcagtcagcacaatg
cagaagggaagcgctttggatatcaagagctttgcaggagttttctgtgttctggctggt
ggcatggtcctgtcctgtttcatagcaatgttagagacatggtggaacaagacaaaaggc
tcaagggtaccatctaaagaggatgataaggagatagacctggagcacctccatcggcgg
gtgaatagcctctgcacagaggatgacagcccccacaagcagttctccacctcctctatt
gacctgactcctctggacattgactcgctgcccacacggcaagctctggagcagatcagt
gacttccggaacacacacatcaccaccaccaccttcatccctgaacagatccagactctg
agccgcagcctgtcagctaaagctgcgtctggattcacctttgggggcgtgcaagatcac
cgaactggccctttcaggcaaagggctcccaatgggggctttttcaggagccccatcaag
acaatgtcaactatcccttaccagcaaacatcctctactggcttcaactttggcaatgac
cccgatcgaggcacctcaatatga
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