Polyodon spathula (Mississippi paddlefish): 121319589
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Entry
121319589 CDS
T07273
Name
(RefSeq) PR domain zinc finger protein 4-like
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121319589
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121319589
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
SET
zf-met
Zn_ribbon_Com
zf-C2H2_16
HypA
Zf-C2H2_ZNF451_C
zf-C2H2_15
Mut7-C
zf-C2H2_ZNF142_18
Motif
Other DBs
NCBI-GeneID:
121319589
NCBI-ProteinID:
XP_041113111
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Position
8:21093117..21113359
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AA seq
800 aa
AA seq
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MNDINLSPVGMDHLSVSSVSGSIPVTGGHLGLATSPTHHPIATPGMPVAIPNFGPSLGSL
PSALSLMLPMGPLGDRGVMCGIQERNYTLPPPPYPHLESSYYRHILPGILSYLADRPPPQ
YIHPSSLNMDGNPALSVPSNSSALDPYQPGGVVGLEPSLVTLDSRQVGAHSAQSLHPSSG
HEVPLDTGMDMEPVSRVTSPISTDGMGENLTMEGVAGEHQQLPASSGNHENIVVDSVGNG
LPAEAVGHGGVIPIHSGALELPVVMESEHLDGRVTSGGLGESLHTVGMSSNSVRVVLSSS
HPAMNPLEPGSIHGANISLEPVSVSSVTAEVSLGHGQVDVSPENLVLVPSSLQMEDSNSN
KENMATSFTVWCTLCGQAYPSDCPQHGPVTFIPDTPIESRARLSLPRQLILRQSGTGAEL
GVFSREPILVRTCFGPLVGQQCGSLDVSDWSDKASLHIWKVIHNNVLEFCVVTTDENECN
WMMFVRKARTGREQNLVAYPHNGKIYFCTSREILPDHELLFYYSRDYARHIGVPENPEAQ
ICHRGKECASYSELKSSLNSHTNSHSPSQVHSSKLVSSHWPGHPKERKFKCAMCSRAFTS
STKLNVHIMGHVGMKPHKCEFCSKAFSDPSNLRTHLKIHTGQKNYRCAACEKSFTQKAHL
VSHMIIHTGEKNLKCDHCDKMFMRRQDLKQHILTHTQERQIKCPKCDKLFWRANHLKKHL
NSHEGRRDYICEKCTKAFLTKYHLMRHLKICKGPKSESAQDLDEEEDDEEEEEEEEDVLI
EPARLTSSMYAPDQTLTPHK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacattaacctgagtccagtggggatggaccatctgagtgtctcctctgtttct
ggctcaatacctgtgactgggggtcacctggggctagcaacctcacccacccaccacccc
attgccacgccaggtatgccggtggcgattcctaattttggcccctctctgggctccctc
ccctcggccctgtccctcatgctgcctatgggacctctcggggaccggggggtgatgtgt
gggattcaagagaggaactataccctgccgcctcccccttatcctcacctcgagagtagc
tactacagacacatcctgccaggcatattgtcatatctagcagacagaccaccacctcag
tatatccaccctagctccctaaacatggatgggaaccctgctctctccgtgccaagcaac
tcctctgccctcgacccataccagcctggaggagtggtgggattggagcccagcttggtg
actttggactcccggcaggtgggagcccacagtgcccaaagccttcaccccagcagtggg
catgaagtgccactggacactggcatggacatggaaccggtgtctagagtgaccagtccc
atctccacggacgggatgggagaaaacttgacgatggagggggtggcaggggagcaccag
caactacccgcgagctccgggaaccacgagaacattgtcgtggattctgtgggaaatggt
ttgccggcagaagcggttggccatggtggtgtcattcccatccactcaggggccctggag
ttgcctgttgtcatggaatcggagcacctggacgggagggtcactagcggtggcctgggt
gaatctctccacacggttgggatgagctccaactcggtcagggtggtcctctccagctct
catcccgccatgaaccccctggagcctgggtccattcatggggccaacatcagcctggag
cctgtctctgtgtcgtccgtcacagccgaggtgtctctgggacatgggcaggtggacgtg
tccccagagaatctggttcttgtgccttcctctctgcagatggaggattccaactcaaac
aaggaaaatatggccacttcctttacagtatggtgcacgctgtgtggccaggcctaccca
tcggactgccctcaacacggtccggtcacctttattccggatacccctattgagagccgt
gctcgactctcactgcccaggcagctcatcctgagacagtctggaactggagctgaactc
ggagtattttctcgagagcccatcctggtgaggacctgctttggacccctcgtcgggcag
cagtgcggctccttggatgtgtctgattggtcagacaaggcctctcttcatatctggaag
gtgattcataacaatgtgctggagttctgtgttgtcacgacagatgaaaatgaatgtaac
tggatgatgttcgtgcgcaaagcaaggactggcagggagcagaatctggtagcctacccc
cacaatggtaaaatatatttctgcacttcaagagagattcttcctgaccatgagctcctg
ttctactacagcagggactacgccaggcacattggtgtccctgaaaatcctgaagcacaa
atttgccatcgtggcaaggagtgtgcgtcctactcagaactgaagtccagcctgaacagc
cacactaacagccacagcccaagccaggtgcacagcagcaagctggtgagcagccactgg
ccaggccaccccaaagagaggaagttcaagtgcgccatgtgttcccgtgcgttcacctca
tccaccaagctcaatgtgcacatcatgggccacgtgggcatgaagccacacaagtgtgag
ttctgcagcaaagccttcagtgaccccagcaacctccgaacccatctgaaaatccataca
ggccagaagaattacaggtgtgcagcctgtgaaaagtctttcacacagaaggctcacttg
gtgtcgcatatgatcatccacacaggagagaagaacctgaagtgtgatcattgtgacaag
atgttcatgaggaggcaggatctcaaacaacacattctgactcacacacaggagcgtcag
atcaagtgccctaaatgtgacaaattgttctggcgagcaaaccatttgaagaaacacctg
aactcccacgaaggaaggagggactatatctgtgagaagtgtacaaaagctttcctgacc
aaataccacctcatgagacacttgaaaatatgtaaggggccgaagagcgagtcagcacaa
gacctggacgaggaagaggatgacgaagaagaggaggaggaggaagaggacgttctgatt
gaaccagccagattaaccagtagcatgtatgcccctgaccagacactgactccacacaag
taa
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