Polyodon spathula (Mississippi paddlefish): 121319622
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Entry
121319622 CDS
T07273
Name
(RefSeq) host cell factor 2-like
KO
K27390
host cell factor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121319622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121319622
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121319622
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
121319622
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121319622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
NANM
Motif
Other DBs
NCBI-GeneID:
121319622
NCBI-ProteinID:
XP_041113159
LinkDB
All DBs
Position
8:23748432..23760192
Genome browser
AA seq
815 aa
AA seq
DB search
MAAEGPIWRKVNTFSGPVPRSRHGHRAAAVRELLIVFGGGNEGIAEELHVYNTVSKQWFL
PAVRGDIPPGCAAHGFACEGTRILVFGGMVEFGKYSNSLYELQASRWLWKKLKPKPPRNG
VPPCPRLGHSFTLFGNKCYLFGGLANGSDDPNSNVPRYLNDFYELELQAVSGVKGWNIPE
TKGTAPSARESHTAIIYSSKGSYSPKLYIFGGMQGYRLGDLWQLDLETMTWKLPETKGPS
PLPRSLHSANVIGNKMYIFGGWTPILTNEDKSSAFYNEWSCTNSMSYLNLDTMTWNCLAW
ERQEDGKSSSPRPRAGHCAAVIGSRLYIWSGRDGYRKAWNYQVCCKDLWYLETKKPSTPS
PVFLVKATLQSLHVAWHPLPAAESYLLQLQPEPTAPASPTTLSSNQLSSAHPPATVPLKE
LQQGAAATLLELSGTTGAQAAQNTGSTVLSQLQSGEEAAHTLKVPSHVLSYIERENSSLR
KPGCNESTTVNIMDQNAVCVAEGNDYPDTGPPSATGLVLADQDTTANLAPPNQMKESTLK
SEPVETELSNDAAPLPQKSQELDNTTPATLTTTSITSTKSNIQMEHTELADNQWYDVGIF
KTLFSEVTHYYLPPVDSKGNLEPMNSPDYEGLNQQALTPGAVYRFRVAGINSCGQSQFSQ
VSEYKTCQPGFPGAPSSVKITKAADCVHITWEPPASPSGKILEYSMYLAVQKSHSSTAVS
SSQLAFIRIYRGTKIHCTVTSSQLSNALIDCTSRPAVVFRIAAKNEQGYGPATQIRWLQD
AFKARPSPVAAPQSTDKQPLELPDGTGTLKTKTET
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaggtcccatctggagaaaggttaacaccttcagcggcccggttccacgg
tcccgacacgggcaccgtgcagccgctgtacgggagctactcatagtcttcgggggaggg
aacgaggggattgccgaggagctgcatgtttacaacaccgtttcgaagcagtggttcctg
cctgcagtgcgaggagacatcccacctgggtgtgcagcacatggctttgcctgcgaaggg
accaggatcctggtatttgggggaatggtggaatttgggaaatacagcaacagtctttat
gagttacaggcgagccgatggctttggaagaagctgaaacccaaaccccctaggaatggt
gtacccccctgtcctcgacttggtcacagcttcacactcttcggcaacaaatgctacctt
tttgggggcctggctaacggcagcgatgatcccaatagcaatgtccctaggtacctgaat
gacttttacgagctggagctgcaggcagtttcgggtgtgaaaggctggaatattcctgag
acaaaggggacggcgccctccgcgcgagagtctcatacagccatcatctatagcagcaag
ggctcttactcccccaagctctacatctttgggggcatgcaggggtacagactgggggac
ctctggcagcttgatctagaaaccatgacatggaaactgccagaaaccaaaggcccatct
cctctacccaggagtctccactccgctaatgtcattggaaataagatgtacatatttggt
ggctggactccaatattgacgaatgaagacaaatcaagtgccttttataatgagtggtcc
tgcaccaattcaatgtcttaccttaacctagacaccatgacgtggaattgcctggcatgg
gagaggcaggaggatgggaagtcgagcagcccacggccccgcgcaggacactgtgctgct
gtcattggctcccgcctctatatctggagtgggagggatggctacaggaaagcctggaac
tatcaggtgtgctgtaaggacctctggtacctggagaccaagaagccatcaactccatct
ccagtgtttttagtaaaagctacccttcagtcccttcacgtggcctggcacccactccca
gcagcagagtcctatctactccagctgcagcctgagcccacagcaccagcttccccaaca
accctttcctctaaccagctctcatcagcccatccacctgccacagtgccactaaaagag
ctgcaacaaggagcagcagccaccttgctggaattatcaggtaccacaggagcacaagca
gctcagaacacaggcagcactgtcctctctcagctgcagtcaggagaagaggctgcacac
accctcaaggtaccatcccatgtgctatcatatatcgaaagggagaacagttcactgaga
aagccagggtgcaatgagtcgactactgtgaatattatggaccaaaatgcagtctgcgta
gctgaaggtaacgactatcctgatacagggccacctagtgccacaggccttgttcttgca
gaccaggacaccacggcaaaccttgccccacccaatcaaatgaaagagtccacacttaaa
tcagagcctgtggaaactgaacttagtaatgatgctgcaccgctacctcagaagtctcaa
gaactagacaatactacaccagccactttgacaactacctcaataacttccactaagagc
aacattcaaatggaacacacagaactggcagataaccagtggtatgatgtggggatcttt
aaaacacttttctctgaagtgacgcactattacctaccaccagtggacagtaaagggaat
ctggagcctatgaattcccccgattatgagggcctaaaccaacaagccttgacccccggt
gctgtttaccgcttcagggtggctggaataaacagctgcggacaaagccagtttagtcaa
gttagtgaatacaagacctgccagcctggctttcctggagcaccgtcatctgtcaagata
acaaaggcagcagattgtgttcatatcacttgggagcctccagcttcgccctctggtaaa
atcctggagtattccatgtacctggcagtgcagaaaagccattcaagcacagcagtgagc
tccagccagctggccttcatcaggatctacaggggcaccaagatccactgcacagtgact
tcctcccagctgagcaacgcactcatcgattgcacgtcgagacccgctgtggtgttccgc
atcgcagccaagaacgagcagggctacgggccggccacacagatccggtggctacaagat
gcatttaaagccagaccatctccagtagcagctccacagagcacagacaagcagccactc
gaactgccagacggcactggaaccttgaagaccaaaacagagacgtga
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