Polyodon spathula (Mississippi paddlefish): 121319649
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Entry
121319649 CDS
T07273
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121319649
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121319649
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121319649
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
Others
121319649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
End_tail_spike
Motif
Other DBs
NCBI-GeneID:
121319649
NCBI-ProteinID:
XP_041113260
LinkDB
All DBs
Position
1:39433296..39536059
Genome browser
AA seq
2520 aa
AA seq
DB search
MKGLKGKFNKKQLFKRSGSDKYAETSTFQFSRGSCHTFKVYGPEIGDIKNIILEHDGLEK
QQAWYVEEVSVINTVRDKSWCFPCQSWLSLFHTDCQLSRTFTPAGKTDLALAGKTHPKST
EDRESERKAKLSQAALLCQGEKSGPCVLACPFLKKNKHDEEIEEDDVEERQSKPKSKSKA
VANGGTREGKKSRNTEESEIPENVKPKTKKKGEANGKLKQKKKSEEDHEEDDEVIGNDVK
SRKEKNNNDIKTKDKKKKAKELSEDESVKEEVSEKKKKKSTSTEKEDMGSKDKRLKEGRK
KHKKKPSEEEEEIPEAEEDPKKKKKGKKSKKGSAGSDEEKTDKKKGKGKKSKKQVDYSEI
YEQELKNYNTDSSDGCEDEYHKRKVYEVVTITGDVRGAGTDANIFVTLFGEYGITPKVHL
ASKSRTAFEKNKTDVFRIKTNNVGQITKIRIEHDNTGMNASWFLDRVVVTDMNRPHLRYY
FPCNNWLSREEGDGLYVRDLLGSLNPMDVPKLNKYIVSVFTADIKGSGTDADVFLNIFGE
NGDTGERRLDNDKNNFERGSEDKFTIEAPNLGRLRKITIGHNNKGSSAGWFLDKVIVDDM
GNKAVYEFPVNRWFAMDEDDGKIQRDILVGGSQATGIVYNVSVVTGKVRGAGTNSKVHII
MHGSKGIKNSGKIFLEGGQFERGLTDIFNVEIAALLSPLSRVTIGHDNNGVSSGWFCEKV
IVYCPFTGIEQTFPCDKWLDEDEGDGLIERELYEMVSLRQKKQKKQPWSLWIWTSDIKNA
GSDANVFLQIYGERGKSDEMRLDNNSDNFETGQTDKFMIELPDLGALFKLRIWHEKRNPF
AGWHLNKVTLLKTLSKEKYTFNCGRWLDMNEDDNEIIRELPAEGVLVKKPLPIVKYRITI
YTGTKSGSGTDASVFICLIGDMGDTGERVLYASKNNVNKFESGNADEFLIEAVSLKQVRR
VRIGHNGRGGGCGWFLDKVVVREEGQPETQAVEFPCNRWLDRNEDDGQIVRELVPAGEAP
MLRNISYHIAVKTGNIPGASSDSKVFVKLYGEKGDTNKQLLVVSDNDLHNYFETGHTDIF
TIDTVDIGKINRLLIGHNNEGLRAGWFLDSVQIKVPLHGKQYMFPCHRWLCKDEADGKVE
VEIYPSEILDIEKLDNYEITVHTGNVRAAGTNASVFIQIYGEKGKTELISLQNRSNNFER
GSTEVFKVEAAGVGKLFKIRIGHNGKGAMDGWYLESVIIKHLTTSIMDEGDGELVVELLP
EDSEDLEENTYEVHVFTGSVLGAGTDANVYINVYGEMGDTGERHLKKSNNLNKFEKGQED
IFIIPATDLGLLKKLRIRHDNSHAQAAWFLDRVEIIDGKDDTTYYFPCERWLATDEDDGQ
IARELVPVDEAFMKKNSDSDKQSQATLGLEQKAQSTTYTVTVKTGDKKYAGTDANVFITL
YGDKDDTGIVNLKASKTYKNKFERGQIDEFTVEAVDIGMLKKIRIGHDCQGNSSGWFLDW
VEIDAPSLGQKLRFPCGRWLDKAEDDGATERDLFPANLQTQEYIPFVPYEITTYTSDIYG
AGTDADVFIALYGRDSICTQQKSLCVNKRERRMYFERGAADKFIVELEDVGDVIEKIRIG
HDGKGINSGWHLDRVEIRRLLPKGKGSETVIFPCERWLAKSEDDGEIVRELVPSEIIQEK
LLRDGTLKRTESIVEDALETHTYTVSVYTGDVYGAGTDANVFLTIYGDLGDTGERKLSKS
ETNSNKFERGQVDKFTIEAVDLGQIYKLNIRHDNTMMNADWYLEQVEIMDRDTEETYLFQ
CERWLSKNKEDKKIERILYVKGYDGDRSSLNSSKKSLKDSSLSLKTLGSNMNKKNKRKNI
LDEIVEEGATISYHITISTGSERDSGTTSRAYIIIMGSHQVQTARLWLDLPEDKTGFAPG
SMEKFQVEGADVGEIKKIELGHDGATPESCWLVEELAVAVPTKGVMYIFQCKCWLAKDRG
DGLTARIFSILDADSINIGQKVLYKVTVVTGDTQNAGTDANIYLLVFGANGTTEEILLCK
NGNRFERGQEDTFAMEIDDVAPLRKIRIRIDGKGSRPDWFLNKIIMQNMSTQEVSVFTYN
EWLSKTRGPKRTTVCELAAVVDDEEMVEKTTYTIMVKTSDISGAGTDANVYIIVFGENGD
TGTIPLKECNNTNKFERKQMDVFKFPEMLSLGELSKVRVWHDNKGASAGWHLEFIEVKDE
TMDKTFRFHCDRWLAKNEDDGQIIRELPCANNDVLDFTERTKYDILTVTSDMDDADTKEN
VWIVLEGNKGRSKEFLLENSTKKKRFLRGATDKFDFSSKNVGDIANICLGHCPKEGKKFT
SRNDAYWHVEEIIVTERELGNKYIFRCNAKIPLSAKRDDFLSFECAKAVESFASKARSLV
PVKYEIIVITGGEKGAGTDANVFITIYGSNGDSGKRALQQKFRNLFERGRTDRFIVEMLD
LGEIHKVKVEHDNSSMSPGWLLDRVEITNTATGVTTLFLCGKWLDKKKGDGQTWRVLYPK
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtctgaaaggcaaattcaacaaaaagcaactttttaagcgttcaggctcagac
aaatatgctgagaccagcactttccagttcagcagagggtcctgccatacttttaaagtg
tacggacctgaaatcggggacatcaagaacatcattctagagcatgacggcctcgagaaa
cagcaggcatggtatgtagaagaggtgtctgtcatcaacacagtcagagataagagctgg
tgcttcccatgccaaagctggttgtctctgttccacactgactgccagctgagtcgcaca
ttcaccccagcaggaaagactgaccttgctctggcaggcaaaacccatcctaaaagcaca
gaggatcgagagagcgagaggaaagccaagctatcccaagctgccctgttatgtcagggt
gagaagtcaggcccatgcgtcctagcttgtcccttcctgaaaaaaaacaaacatgatgag
gagattgaagaagacgacgtagaggaaaggcagtcaaagccgaaaagtaagagcaaagcc
gttgccaacggaggcactcgcgagggcaaaaagtccagaaacacagaggaatccgagatc
ccggaaaacgtcaaaccaaagacaaaaaaaaagggtgaggccaacggaaaattaaaacaa
aagaagaaatcagaagaagatcatgaggaagatgatgaagtgataggcaatgatgtcaag
agccgaaaggagaagaataataatgacataaagacaaaggacaagaagaagaaagcaaaa
gaactgtctgaagacgaaagtgtgaaggaagaagtcagcgaaaaaaagaaaaagaaatca
acctcgactgagaaggaagacatgggttcgaaagacaagaggttgaaggaaggcagaaag
aagcacaagaagaagccttctgaagaggaagaggagataccggaggcagaggaggatccc
aaaaagaagaaaaagggtaaaaaatccaagaaaggttcagcagggagtgacgaggaaaag
acagacaaaaagaaagggaaaggcaagaaatccaagaagcaagttgactacagtgagatt
tatgagcaggagctgaagaactacaacacagactcctctgatgggtgtgaggatgagtat
cacaagagaaaagtttacgaggtggtcacaatcacaggagatgtccgaggagcaggaacc
gatgccaacatttttgtcactctctttggagaatatgggatcacgcccaaagtgcacctt
gccagcaagagcagaacagcttttgaaaagaacaaaacagatgtgttcaggatcaaaaca
aacaatgttgggcaaataacaaaaataaggatcgagcatgataacactgggatgaatgcg
agctggttccttgacagggtggtggtcacggacatgaatagaccccacctccgttattat
ttcccttgtaacaactggctcagcagagaggagggggatggactctacgtgagagacctg
ttgggcagcctcaaccctatggatgtaccaaaactcaacaagtatattgttagtgtattc
actgcagacattaagggcagtggtacagatgcagatgttttcctaaatatatttggcgaa
aatggagatacgggtgaaagaaggctcgacaatgacaaaaacaactttgaacgggggtct
gaggacaagtttactattgaggctcccaatttgggacggttgaggaagatcaccattggc
cacaacaacaagggctcctccgctggctggtttctcgacaaggtgatagttgatgatatg
ggcaataaagctgtgtatgagttccctgtgaaccgttggtttgcaatggatgaagatgat
ggcaaaatccaacgggacatcctggtgggaggcagccaggccacaggtattgtttacaac
gtctctgtggtgactggcaaagtcagaggtgctggcaccaactccaaggttcatattatc
atgcacggctccaagggcatcaagaacagtgggaagatcttcctggaggggggacagttt
gagcgggggctgacagacatcttcaatgtggagattgctgctctgctcagcccccttagc
agagtcaccatcgggcatgacaacaacggggtcagctcgggatggttctgtgaaaaggtg
atagtgtactgtccattcactggcattgaacagactttcccatgtgataaatggctggat
gaagacgagggagatgggctgattgaaagggagctctatgaaatggtgtccctccggcag
aagaaacagaaaaaacaaccatggtcactgtggatctggaccagtgacatcaagaatgcg
gggagcgatgccaatgtcttccttcagatttatggggagagggggaaatcggatgaaatg
agactagacaacaactcagataactttgaaactggtcaaacagacaagttcatgattgaa
cttcctgatttgggagctcttttcaaacttagaatttggcatgaaaaaagaaacccgttt
gcaggctggcatttaaataaggtcaccttgttgaagacactgtcaaaggagaagtacaca
tttaactgtggccgatggctggatatgaatgaagatgacaatgagattatcagggagctg
ccagcagaaggagtactagttaaaaaacctctgccaattgtgaagtacagaatcaccatc
tacacaggaaccaagagcgggagcggcacagacgcctctgtctttatttgtctcattggt
gacatgggagacacaggagagcgggtcttgtacgccagcaagaataatgtcaataaattt
gaaagcggaaatgcagatgagttccttatcgaggcggtgtctttgaagcaggtgaggcga
gtgaggatcgggcacaacggcagaggtggtggctgtggctggttcctggataaagtggta
gtaagggaggaaggacagccagaaacacaggccgtcgaattcccttgcaacaggtggctt
gacaggaatgaagatgatggtcagatcgttcgagagctagtgccagctggagaagcacca
atgcttagaaacatcagttaccacattgcggtgaagacaggcaatattccaggtgccagc
tcagactccaaggtgtttgtcaagctctacggagagaagggggacactaacaaacagctc
ctggtggtctctgacaatgacctgcacaattactttgaaacaggacatactgatattttc
acaattgacactgtggatattggaaagatcaaccggctcctgattggacacaacaacgaa
ggcttgcgtgctggttggttccttgacagtgttcaaattaaggtgcctctccacgggaag
cagtacatgttcccctgtcatcgctggctctgcaaagacgaggctgatgggaaggtggag
gtggagatctaccccagcgaaatactggacattgaaaaattggataactatgaaattaca
gtgcacactggcaacgttcgggctgccggcactaacgccagtgtcttcatccagatttat
ggggagaaaggaaaaacagagttaatcagccttcagaacagatcgaacaactttgaacga
ggatcaacagaagtgtttaaggtggaagccgcaggcgttggcaagctctttaagattcgg
atcggccacaatgggaagggtgctatggacggctggtacctggagtcagtcatcatcaag
cacctcaccacctcgataatggatgagggtgatggggagctggtggtggagctgctgcca
gaggacagtgaagacctggaagagaacacctacgaggtccatgtgttcacagggagtgtg
ttgggtgctggaacagatgccaatgtgtatattaatgtgtatggagaaatgggagacaca
ggagagcggcacctgaagaagtcgaataacctcaataagtttgagaaaggacaggaagat
atatttataatcccagctactgatctggggctgttgaagaagctgcgaattcgccatgac
aactctcatgcacaagctgcctggttcctagacagagtggaaattatagatggcaaggat
gacactacgtactatttcccatgtgagcggtggttagctactgatgaagatgatgggcag
atagcccgagagctggttcctgtagatgaggcatttatgaaaaagaactcagacagcgac
aagcagtctcaggctactctcggactggagcagaaagctcaatctacaacctacactgtg
acagtcaaaactggagacaaaaagtatgctggaacagatgctaatgtgttcattaccctg
tatggcgataaggatgacacaggaattgttaacctcaaagcttctaagacttacaagaac
aagtttgagcgagggcagattgatgagttcactgtggaggctgtggatattgggatgctg
aaaaagatacgaatcgggcatgactgtcagggcaactcgtcgggctggtttctggactgg
gtggagattgacgctccttcactgggtcaaaagctgcgcttcccctgcgggcgctggctg
gacaaagcagaggatgatggagcgactgagagggatctctttcctgcaaacctccagact
caggagtacattccatttgtgccttacgagatcaccacatacactagtgatatatatggt
gccgggacagatgctgatgttttcattgccctctatgggagagacagcatctgcactcag
cagaaatcactgtgtgtcaacaagagagaaaggcgcatgtactttgagcgaggcgcagct
gataagtttattgtagagctggaggatgttggtgatgttattgaaaagatcagaatcgga
cacgacgggaagggaatcaactctggctggcacttagacagagtggaaatcaggagactt
ctgcctaagggaaaaggatcagagacagtaatcttcccctgtgaacgctggcttgctaaa
tccgaagatgatggggagattgtgcgggagttagtgccatcagaaatcatccaggagaag
ctgctgagggatgggacgctgaagcgtaccgaaagcattgtggaggatgccctggagacc
cacacgtacacagtgtctgtgtacactggggatgtgtacggcgctggcactgatgccaat
gttttcctcaccatctatggagatctgggagacactggagagaggaaactcagcaagtct
gaaaccaactccaacaagttcgaaagaggacaggttgataagtttacaattgaagcagtg
gatctggggcagatttacaagttaaatatccgccatgacaacaccatgatgaatgccgac
tggtacttggagcaggtggagattatggatagggacacagaggagacgtacttattccag
tgtgagcgctggctctccaagaacaaggaagacaagaagattgagaggattctttatgtt
aagggctatgatggagatcggagcagcctcaacagctcaaaaaagagtttgaaagactcc
tctctgagcctgaagactctgggcagcaacatgaacaaaaagaacaagaggaagaacatc
ctggatgaaatcgtagaggagggggccacgatttcttaccacattactatatcgactggt
tcagagcgggattctggcacaaccagtcgcgcatacatcatcatcatgggatcccaccag
gttcaaacagcccgactctggctggatctcccggaggacaaaacgggctttgccccagga
tccatggagaaattccaggtggagggagcagatgtgggagagatcaagaaaattgagcta
ggtcatgatggggccactccagagagctgctggctagttgaagagctagccgttgccgtg
ccgaccaaaggtgtcatgtatattttccaatgcaaatgctggcttgccaaagacagaggg
gatggtctcacagctcgcattttcagtatacttgatgctgacagcatcaacattggacaa
aaggtcctttataaggtaacggttgtcactggagacactcagaatgctgggactgatgcc
aacatttacttgttagtatttggagccaatgggactacagaggagatcctgctctgcaaa
aatggaaacaggtttgaaagaggtcaagaagacacctttgctatggagattgatgatgtt
gctcctctaaggaagatacgaatacgcatagatggaaaaggaagccgccctgactggttc
ttgaataagatcattatgcagaatatgagcacccaggaggtttctgttttcacctacaat
gagtggctctcaaagacacgaggacccaagagaaccacggtgtgcgagttggcagcagtg
gttgatgatgaggaaatggtggagaaaaccacatacaccatcatggtgaaaaccagcgac
atatcaggggctggtaccgatgccaatgtctatatcattgtgtttggagaaaacggggac
acgggcacaatcccactgaaagaatgcaacaacaccaacaagtttgagaggaaacaaatg
gacgtctttaagttcccagaaatgctgagtctgggagagctctccaaggtcagagtatgg
catgacaataaaggtgcttcagcaggctggcacttggagttcatcgaagtgaaggatgaa
acgatggataaaacattccggttccactgcgatcgttggctagcgaagaatgaagatgat
gggcagatcatacgggaactgccctgtgcaaataacgatgttctagacttcacagaaaga
acaaagtatgacattcttacagtaacaagtgacatggatgatgcagacacaaaggaaaat
gtttggattgtgttggaagggaataagggcagatccaaagagttcctgctggagaattca
accaagaaaaagaggttcttaaggggggctactgacaaatttgatttttcctcgaaaaat
gttggtgatattgccaacatctgtcttggccactgtccaaaagaaggaaagaaatttaca
tcgagaaatgatgcttactggcatgtggaagaaatcattgtcacagagcgggagcttgga
aacaaatacattttccggtgtaatgcaaaaataccattgtcggccaagagggatgacttc
ttgagttttgagtgtgccaaggcggtggagagctttgccagcaaggcccggagcctggtt
cccgtcaagtacgagatcatcgtcattacaggaggtgaaaagggggccggaactgacgcc
aatgtcttcatcactatttacggctccaatggcgactctggcaagcgggcgctgcagcag
aagttccggaacctctttgaacgcggacgaactgaccgtttcatagtagagatgctggac
ttgggggaaatccacaaagtcaaagttgaacatgataacagtagcatgagtccgggatgg
ttattggacagggtggagatcaccaatactgccacgggcgtcactacccttttcctttgt
ggcaaatggttggacaagaagaaaggtgacggacagacttggagagtgctgtacccgaaa
tag
DBGET
integrated database retrieval system
