Polyodon spathula (Mississippi paddlefish): 121319703
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Entry
121319703 CDS
T07273
Name
(RefSeq) early endosome antigen 1-like isoform X1
KO
K12478
early endosome antigen 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121319703
04145 Phagosome
121319703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319703
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121319703
Protein recycling
Other Rab GTPase associated proteins
121319703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ATG14
ADIP
FYVE_CARP1-2
zf-Di19
Plasmid_RAQPRD
IBR
Motif
Other DBs
NCBI-GeneID:
121319703
NCBI-ProteinID:
XP_041113330
LinkDB
All DBs
Position
8:27300260..27335302
Genome browser
AA seq
1444 aa
AA seq
DB search
MFRRILQRTPGKGNSQSSDSDQPAAAEVNHEESSEGFICPVCMCSYKTSTDLFDHYQSEH
GEADTKPQEQRNPLPFTGFICPQCMKAHASAEELFKHYEAFHESSGQSVHRGSNNQSPGR
DNLTFLQQEVQDLQASLKEERWFSEELKKELEKVQGQLKQSPQTDGNTEGSTELQSLELK
LQEAETEKFNIKQVKDLFEQKAAQLATEIVDIKSKYDEEKSLREVGEQRVKSLLQDLQNE
RTEKENLNTELLQRPGVEDVEVLKKELIQVQTVMDQMTRESEEESERLKNQYKQLQADFT
TSEKTISQLRAELAKGPQEVAVYTKELQKLQSSLNVLEQQNQSFSEKLSKKGKECEELEK
RLNEEVTSKKDLQASLQQKELDCQQLQAQASSMETSLQRVQIELSERGEASQKLKGELSE
VEVRHQQLKAEFKQVQQQREEKEQQGLQQQNEINQLHSKLLETERQLGEVQGRLKEQRQL
SGEKLKDKEQQMTDLQLKLSRAEEQLKENAVSSTELQHQLDKARQQHQELQGVQQNAASK
LREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKDSITQLETERDDLCAKIQAGDGETAVL
NQLQEKNHALQEQVTQLTDKLKNQSESNKQAQDNLHEQVQEQKTHLRGAQDRCLSLETTI
SELNGQITESKEKVTQLDSQLKAKTELLLSAEAAKAAQRADLQNHLETAQHALQDKQQEL
TKIKAQLDQVSTKLEDKKEHCSQLESSLKESKEKLLNSEQKIEQLEGQVKKHEADLQEVQ
MNREQLQQDLEKQKKQNSETENKVKELCKQLDAEKGVVTTVKEELQKTSSALEETKQQLT
KQEEDKVNLKQDLEKLRQEAKTRQEELSNKAQALTGNLQKTQQEKESLLKDLAAMKENLS
KISQSLKESQTQLEKQKQNEKEALDQKEKSHQKVNQELQKKAESAAKEVNEVKSLLQKKD
ETEKELKSQLASVSTQLLKVQEGLKEKEKAEQQLQTKLKVAHEASIQEIKKLEAQLTDLQ
TVHLQKVEDEEKLKEQLLQELNDEKGKLTELQKCYDSTKESECKLQSDLYGKESELSAIR
QDLKTTEEKLTLAQEELVTNRNQLTSHSQLIQELKAAKTELGQDVVKKNEQIKQQEKNLQ
EEQKQKTLKEEELKKEKSKAAELNELKSKLEKEVSKLTEGQRMLKEQYEKELTNLKDAKQ
FLIQQKLDTQGVADSLRSALEQEKKDHKTTREAICKREEELKKEQAQRESKLNAELKAKE
EQKKRHEEAEAKLSMQITALNENIGTLKKEWQSSQRRVGELEKQTDDLRGEIAVLEATVQ
NNQDERRALLERCLKGEGEMEKHQMKMMEMRRKLDDTTAAMQELGRENQTLQIKNSQALT
RKWAEDHEVQNCMGCGKGFSVTVRKHHCRHCGNIFCGECSARNALTPSSKKPVRVCSTCF
DELQ
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgttcagacggattttgcagcggacaccagggaaaggcaactcccagagctcagactca
gatcagccagctgctgcagaagtaaatcatgaagaatcctctgaggggttcatctgtcct
gtctgtatgtgttcttacaaaacgtctactgacctgtttgaccattaccagagtgaacat
ggggaggcagacacaaagccacaggagcagcgaaatccactgccttttaccggttttatt
tgtccacaatgtatgaaggctcatgcctctgcagaagagctgttcaagcactatgaagca
tttcatgaatccagcggccagtctgttcatagagggtcgaacaaccagtccccaggaagg
gataatctaacattccttcagcaagaagtgcaagatcttcaagcctcacttaaggaggag
cgctggttttcagaggagctgaaaaaagagctggaaaaagtacaagggcagctgaagcaa
agtcctcagactgatgggaacaccgagggatcaacagaactgcagtctttagaactcaag
ctgcaagaagctgaaacagaaaagttcaacatcaagcaggtgaaggatttgtttgagcaa
aaagcggcacagctggcaactgagatagtagatatcaagtctaagtatgacgaggagaag
agtctgcgagaggttggagagcaaagagtgaagagcctattgcaggatcttcagaatgag
agaacagagaaagagaacctcaatactgagctgcttcagcggcctggtgtggaagatgtt
gaggttctcaagaaggagctgattcaggtccagactgtgatggaccagatgacccgggag
agcgaggaggaatctgagaggctcaagaatcagtacaagcagctgcaggctgatttcaca
acctcagagaaaacaatatcccagttaagagctgagctggcaaaaggtcctcaggaagtt
gcagtttataccaaggagctgcagaaactccagagctctctgaatgtactggagcagcaa
aaccagagtttctcagaaaagctgtcaaagaaggggaaagagtgtgaggaattggagaag
cgcctaaatgaggaggtgacgagtaagaaggacctacaggccagcctgcagcagaaggag
ctagactgccagcagttgcaggcgcaggcctcatcgatggagacctccctccagagagtg
cagattgagctgagcgagaggggggaggccagccagaagctgaagggcgagctttcagag
gtggaggtcaggcaccagcaactaaaagcagagttcaaacaggtccagcagcagagagag
gagaaggagcagcaaggtctgcagcagcagaacgagatcaaccagctgcactctaaactg
ctggagacggagcggcagcttggggaggttcagggccgcttgaaggagcagagacagctc
tctggagagaagctgaaggacaaggagcagcagatgactgacctgcagctcaaactctcc
cgtgcagaagagcagttaaaggaaaatgcagtaagctcaactgaattgcagcatcagttg
gataaggcaagacaacaacatcaggagctgcagggtgtgcaacaaaacgccgcttccaaa
ctacgagaggcacagaatgatttggaacaagtattgcgtcagattggggataaagaccag
aagatccagaacctggaagctctgctgcagaagagcaaggacagcatcacccagctggaa
acagagcgggatgacctgtgtgcaaaaatccaggcaggggatggggagacagccgtgctc
aaccagctgcaggagaaaaaccacgctctgcaggagcaggttacccaattgacagacaag
cttaagaatcagtcagagagcaacaagcaggcccaggacaaccttcatgagcaggtccag
gagcagaagacccacttgaggggagcccaggatcgctgtctctccctggagactaccatc
agtgagctcaatggacagatcactgagagtaaggagaaagtgacccaactagattctcag
ttgaaggcgaagactgaattgctgctttcggctgaggctgccaaagctgcccagcgagcc
gatttgcagaaccacctagagacagcccagcatgcattgcaggacaagcagcaggaatta
accaaaatcaaggctcagttggaccaggtcagcaccaagcttgaggataaaaaagagcat
tgcagtcaactggagagcagcctgaaggagagcaaggagaagctgctgaactcagagcag
aagattgagcaacttgaaggacaggttaagaaacacgaggctgacctccaagaagttcaa
atgaacagagaacagcttcaacaggaccttgagaaacagaagaagcagaattcagaaacg
gagaacaaagtgaaggaactctgcaagcagcttgatgcagaaaagggagttgtaactact
gtcaaagaggaactgcaaaagacatctagtgctcttgaagaaacaaagcaacagctgact
aagcaggaggaagacaaggtcaacctgaagcaagacctggagaagctgaggcaggaggca
aagacacggcaggaggaactgagcaacaaagctcaagccttgacgggaaaccttcagaaa
actcagcaagagaaagagtctctattgaaagacctagcagcaatgaaagagaatctgtcc
aaaatctcacagtctctgaaggagtcgcagacgcagctggagaagcagaagcagaatgaa
aaggaagctttagatcaaaaggaaaaatctcatcagaaagtgaatcaagagcttcagaag
aaggcagagtctgcagctaaagaagtaaatgaggttaaaagcctgctacagaaaaaggat
gagactgagaaagagttgaaatcccagctggcatcagtaagcactcagctcttaaaagtg
caggagggactgaaggagaaggagaaagccgagcagcagctgcagacaaagttaaaagta
gcacacgaggcctctatccaagagataaaaaaactggaggcgcagctaactgatttacag
acggttcatttgcagaaggttgaggacgaggagaaattaaaagagcagttattacaagag
ttaaatgatgagaaaggaaagttaaccgaacttcagaaatgctatgacagcacaaaggaa
agtgaatgtaaactgcaatctgacttgtacgggaaagaatcagagctttctgcaattagg
caggacctaaagactacagaggagaaactgacgttggcccaggaagaacttgtcacaaac
aggaaccaacttaccagccacagtcagttgatccaagagctgaaagcagccaagactgag
ctggggcaggatgtggtaaagaagaacgagcagatcaaacagcaggagaagaatttacag
gaagaacaaaaacaaaagacattaaaggaagaggaattgaaaaaagagaagtcgaaggca
gcagagctgaacgaattgaagtctaaactggagaaggaagtgagcaagctgactgaggga
cagaggatgctcaaagaacagtatgagaaagagctgacaaacctgaaggatgccaaacag
tttctgattcagcagaagttggatacacagggggtggctgacagcttgaggtctgccctg
gagcaggagaagaaagaccacaagacaaccagggaggcaatctgtaaaagagaggaagaa
ctgaagaaggagcaggcacagagagagtccaaactgaacgcagagctgaaggctaaagag
gagcagaagaagcggcacgaggaggcagaggccaagctgagcatgcagatcacagcgctg
aacgagaacatcggcactctgaagaaggagtggcagagcagtcagcggcgggtgggggag
ctggagaagcagacagacgacctgcgaggggagattgcagtgcttgaggccacggtgcag
aacaatcaggatgagaggagggcactgctggagaggtgtctgaagggtgaaggggaaatg
gaaaaacatcaaatgaaaatgatggaaatgagaagaaaactggacgatacaactgcagca
atgcaagagctgggcagggagaatcaaacgctacagatcaaaaactcccaagcactaacc
cggaaatgggctgaagatcatgaggtccagaattgtatgggatgtggaaaagggttttcg
gtcactgtaagaaagcatcactgtagacactgtggaaatatcttttgcggtgaatgttca
gccaggaatgccttaaccccctcgtccaagaagcctgtgcgagtctgcagcacctgcttc
gatgagctgcagtga
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integrated database retrieval system
