Polyodon spathula (Mississippi paddlefish): 121319739
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Entry
121319739 CDS
T07273
Name
(RefSeq) lysine-specific demethylase RSBN1L-like
KO
K22610
lysine-specific demethylase 9 [EC:1.14.11.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121319739
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121319739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
Motif
Other DBs
NCBI-GeneID:
121319739
NCBI-ProteinID:
XP_041113422
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All DBs
Position
8:28761812..28814139
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AA seq
814 aa
AA seq
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MADSLSFIHFADTDKNPLQKPKEPKGASDSIPQSSRDHHPPPPKKVRNEEKNLKPKKLNG
EGGRGGAVEKQQQKQSYGSPTTWSFNEIKTNTPTQPTQTSLHKVFTPSAFQSTSIKPKKP
KEKREKEKEKNKHKPVPENNSLAGTKKENGEVKLVQKDQNNKEKEKDKKKHKVMNEIKRE
NGEVKLLQKGEKEKPKINAEELQIKKVKKKKKKKHKETEKKKRPKMYSKSSQTIYSGLGS
DSIGQGAKPSKEEECDIKPPAHLFQEDPSMEKKHCNPPNAKPPESRVPPFVSLKKPKVQT
QIPGLDNLEFKRLIHIEQQPNGGALVVHAYSKELSCLSPMEMQRFAEEFVTLSFSEDENC
AAYYVMGIIHGAAMYLPDFLDYFSFNFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSH
GTYRAGAMRQISLVGAVDEEVGDYFPEFISMLEDSPFLKRTLPWGTSSSLKLKSPTDSDD
GPIMWVRPGEQMIPVADMPKSPFKRKRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHI
GQGFERQTTAAVGVLKAVHCGECPDPPRITKDVVCFHAGDFLEAVQRLQLDLHEPPLSQC
VQWVDDAKLNQLRREGIRYARIQLYDNDIYFIPRNVVHQFKTVSSVCSLAWHIRLKQYHP
EAEASNNSNESEEGTETKATLEHTGVNVKASECTVSTDTSVDFKPQQQRKEPKDTKLPEI
KVEPEDLLLEKNTKPAEVTQPQSKVKSQHSECQTTSAKHPHSVLAETPTEVSTPESQSRN
ESSKDMLYTNAPEVTRPHPSVKHHLHEQQKDFLY
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcactgagcttcatccactttgcagataccgacaaaaacccgctccagaaa
cccaaggaacccaaaggagcgtcggatagcataccgcagtcttcccgggatcaccacccc
ccgccgcccaaaaaagtccgaaacgaagagaagaaccttaaacccaagaaactaaatgga
gaaggaggtcgaggtggtgcagtcgagaagcagcagcagaaacagagctatggcagccca
acaacatggagcttcaatgaaattaagacgaacactccgactcagccgacccagacttct
ctccataaagtcttcacgcccagcgcctttcagtccacctccataaagcctaaaaagcct
aaggagaaacgggagaaggaaaaggagaaaaataaacacaagccagtcccagaaaataac
agccttgctgggacgaagaaggaaaacggggaggtgaagttggtgcagaaagatcagaat
aataaagaaaaggagaaagacaagaagaaacacaaagttatgaatgaaattaagagggaa
aatggagaagtgaaattgctgcagaaaggagaaaaagaaaagccaaaaataaatgcagaa
gagctgcagatcaaaaaagtgaagaagaaaaagaaaaagaaacacaaagaaaccgaaaaa
aaaaaacggcccaaaatgtacagcaaatccagccagaccatatactcggggcttggatct
gactccattggtcaaggagccaaaccaagcaaagaggaggagtgtgacatcaaaccacca
gcccacctcttccaagaagatcccagcatggagaaaaagcactgcaatccacccaatgcc
aagcccccagaaagcagggtccctcccttcgtctccttaaagaaacccaaggttcagacc
cagataccagggttggacaacttggagttcaaaaggttaattcacatagagcagcagcct
aatggaggggccttagtagtgcatgcttacagcaaagagctgtcttgcctgtctcctatg
gagatgcagaggtttgctgaagagtttgttacactgtcgtttagtgaagatgagaattgt
gcagcttattacgtaatgggtataattcatggggcagctatgtacctaccagatttcctg
gactacttttcattcaactttccgaactctccagtgaaaatggaaatcttgggaaagaaa
gatatcgagacaactactatgtcaaacttccatgctcaggtaaaaagaacctactcgcat
gggacgtaccgagctggtgcgatgagacagatcagcctggtgggagctgtggatgaagaa
gtaggagattactttccagaattcatcagcatgttagaggactcaccctttttaaaacga
acattaccttggggaacttcttctagtcttaaactaaagagcccaacagacagcgatgac
gggcccatcatgtgggtacgccctggagaacagatgattcctgtagctgacatgccaaag
tcaccttttaaaagaaaaaggactaccaatgaaatcaaaaacctccagtacctacctcgg
accagtgagccccgtgagatgctgtttgaagaccgaactcgggcccatgcggaccacata
gggcagggctttgagcgccagaccacagcagcagtgggggtcctcaaggcagtacactgc
ggagagtgtcctgatccacctcgaataaccaaagatgtggtttgctttcacgctggagat
ttcttggaggcagtgcaaagactgcagttggatctgcatgaaccccctctgtcacagtgt
gtacaatgggtcgacgacgcaaagcttaaccagcttcgacgggaaggaatccgctatgct
aggattcagctttacgacaatgacatttactttataccccgcaatgttgtgcaccagttt
aaaacggtctcgtccgtttgcagcttagcttggcacatacgcttgaaacaatatcaccca
gaggcagaggcgtccaataattccaatgaatccgaagaagggacagaaacaaaagcaact
ctagaacacaccggtgtcaatgtaaaggccagcgagtgtacagtaagcaccgatacctct
gtagactttaaacctcagcaacaaagaaaagagcctaaggacactaagcttccagaaatc
aaagtggaacctgaagacttgcttctggaaaagaacacaaagcctgcagaggtcacacag
ccacaaagcaaagtgaaatcccagcactcggaatgtcaaaccacttcagcaaagcatccg
cacagtgtgctggcagagacaccgacagaagtcagtaccccagaatctcagtccaggaac
gagagttcaaaggacatgctctacacaaacgctcctgaggtcacaaggccgcacccttca
gtaaaacaccacctgcatgagcagcagaaagactttttatactaa
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