Polyodon spathula (Mississippi paddlefish): 121319748
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Entry
121319748 CDS
T07273
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24640
zinc finger BED domain-containing protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121319748
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121319748
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
121319748
NCBI-ProteinID:
XP_041113451
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Position
8:complement(29840967..29851315)
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AA seq
1303 aa
AA seq
DB search
MDSEENLSHNSEDTNSKHDDFTEDNGEPENTKGSGNVKEEPDNSEYETMLTGYTNTLCDA
AVYAKSVAISLGALAKESCSLTSPERLSEMPPELASGQSSVDTQTAILPSPEGVFEKDIK
TLTSPSDVKTKGPILNDDQGSVLQQNKKTMKRKAEKMTDRTSEKINKSKNIKEEPENCIN
DSSEEKNETFVGSPGRYVARENDDYGNLLTGYTSTLYDVAMDAVTQSLLSSMRNNVNPRK
KSPAWNHFLISPRDNTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHPTVLLQDNECS
SNSILNSVATSVLPPINPSSNGELTSQKNTSMVCSPGETEETPSKEVFPMTPTSDKCVKD
ETCMASSPHSSNNHNEDAMENLSVMITTKNSNSRRRSAVWKHFYLSPVDSSKAVCIHCMN
EFSRGKNGKDLGTSCLIRHMWRAHRDIVIEENGNGSSIPPHYSTPPTLLPTFQLPDTGDS
KFKKDSNFITSSPEGMTDEVPQNINESMDIKEEPDDALYHLSTDHALIDTPVTALSFPEG
VSEKDILLTSSPDDLSEGPSLNKDQSSVFQQNKKIMKRVKSEVWHHFIVSPVDHLKALCR
YCPCVISRGKRGDFGTSCLMRHLMRRHPNVLKNQKGTFENIPSSPRSPYATLAAAEALSS
KITENSSMAEEKPHILPVTSKKTSKLWNHFSICTTDPTNVVCLHCSRTISRGKKTTNLGT
SCLFRHMQRFHGNVLENKGNVSRVLVSSSAGSHVGSDSMETTTATTSEDSNERYNEHHPV
AKKITKLVAEMLALDLQPSSLVENDGFNRLLEYLQPQYSIPSSTYFSSTAIPEMYENVKE
VIVSHLKEAEGGIVHFTAGIWVSNQTREYLTLTAHWATFESSFRPPGQDFHCSALLNVSQ
IDCDYNLTDIKKQLEYLWDTWIISSGLKIGFTVTDNQSIANILDDNEQGSMQCFGHTIDL
IVSEAIKSQRMVQNLLSIARKICERVHRSAKAKEKLAELQKAHDLPENQLVQDIPSKWNT
SFYMLERLVEQKKAIDELSIECNFRELISCDQWEVMQSVCHALKPFEVVCREMSTRTATL
GQVIPLIHILNRKIDMLFDETMGIDNMLKSLKDGMVSRMSSLLHDLRYIWATMLDPRYKT
SLFTEEEAEQYKQDLVKELDLLYSTSGERKPIVSNGCSEVSAPSNSVSSSKDNLWALMDD
IRNKIREERPKSSELTVLEYLEEEIVDQSCDPLDYWNLKKFLWPDLAKIAIRYVGCPPSI
IPAETLFSTASKSCSLNQTRSMLENIERRIFLKVNLPLIYFQY
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgaggagaatttgtctcataacagtgaggatacaaattcaaaacatgatgac
tttacagaagataatggagagccagaaaatacaaagggaagtggtaatgttaaggaggaa
cctgacaattctgaatatgaaactatgcttaccggttacactaatactctttgtgatgca
gcagtttatgcaaagtctgttgcaatttctctaggggcattggctaaggaatcgtgctcc
ttgacctctcctgaaaggctgtctgaaatgcctcctgagctggcttctggacaatcatca
gtggacacacaaacagcaatattgccttctccagaaggggtgtttgagaaagacattaag
actttaacctcaccttcagatgtaaaaaccaagggtccaattttgaatgatgaccagggt
tcagttttacaacaaaataaaaaaactatgaagagaaaagctgaaaagatgactgacagg
acatcagaaaaaatcaacaaaagcaaaaatattaaagaggagccagaaaattgcataaat
gacagtagcgaggaaaagaacgagacctttgttggttcaccaggcagatatgttgctaga
gaaaatgatgactatggaaatttacttacagggtacactagtacgctttatgatgtagca
atggatgctgttacacaaagtcttctctcatcaatgagaaataacgttaacccaaggaaa
aagtcacctgcttggaatcattttttaatatctccaagggataataccaaagcaatctgt
atgtactgcatgaaagagtttagtaggggtaagaatgaaaaagacttgagcacaagttgt
ctaatgaggcatgtgcggagggctcatcctacggtacttttacaggacaatgaatgctct
tcaaattccattcttaattcggttgctacctctgtattgcctcccataaatccatccagt
aatggggaactgacatctcaaaagaatacttccatggtatgttcaccaggtgagacggaa
gagactccatctaaggaggtatttccaatgaccccaacatcagacaagtgtgtcaaagat
gagacctgcatggcttcttccccacattccagtaataaccataatgaagatgcaatggag
aatctgtctgtcatgattactacaaaaaattcaaactcaagaagaagatctgctgtttgg
aaacatttttatctatctcctgtagacagttcgaaagcagtgtgtatacattgtatgaat
gaattcagccgcgggaagaacggaaaagatctgggaacaagctgtcttataagacacatg
tggagagcccaccgtgacattgtgatagaagagaatggaaatggttcaagtattccacct
cattattcaacaccccccactttgttaccaacgttccagcttccagacacaggggattca
aaattcaaaaaagattccaatttcataacctcttctcctgaagggatgactgatgaggtg
ccacagaatatcaatgaaagcatggacattaaagaggagcctgatgatgcactttatcac
ctgtctactgatcatgcattaatagacacaccagtaacagcattgtcttttcctgaaggg
gttagtgagaaagacattttgcttacctcatcacctgatgatctgtctgagggtccaagt
ttaaataaagaccagagttcagtgttccaacaaaataagaaaattatgaagagagtgaaa
tcagaagtgtggcatcattttattgtgtctccagttgatcatcttaaagctttatgtaga
tactgcccctgtgtcattagcagaggaaaaagaggagattttggcacaagctgtttgatg
aggcatctgatgaggcgtcatcctaatgttctcaagaaccaaaaaggcacatttgagaat
attccttcatctcctcgatcaccctatgctacattagctgctgcagaagcgctgtcatct
aaaatcactgaaaactcctccatggctgaggaaaagccacacatactacctgttactagt
aaaaagacatctaaattgtggaatcatttctctatttgtactacagatccaacaaatgtt
gtgtgtttgcactgtagtcgcacaataagcagaggaaaaaagactacaaaccttgggaca
agttgcttgttccggcacatgcagagatttcatggaaatgttcttgaaaacaagggcaat
gtctcaagagttctggtatcttcctcagcaggcagccatgttggatcagattcaatggaa
actactactgctactacatctgaagacagcaatgaaagatacaatgaacaccatccagtt
gccaaaaaaattacgaaacttgttgctgaaatgcttgcattggaccttcaaccatcatca
cttgtggaaaatgatggatttaacagattactggaataccttcaaccacagtattccata
ccttcatcaacctatttctccagcacagccattcctgaaatgtatgagaatgtgaaggaa
gtaattgtttcacatcttaaggaggctgaaggtggcattgttcatttcacagctggaatt
tgggttagcaaccagacacgtgagtacttgactcttactgctcactgggcaacctttgaa
tcatcttttagacctccagggcaagatttccactgttccgctcttctgaatgtttctcaa
attgactgtgactacaacctcacggacattaaaaaacagctagaatacttgtgggacact
tggattatttcctctggtctgaaaattggcttcactgtaacggataatcagagtattgca
aatatccttgatgacaatgaacaaggaagcatgcagtgtttcggacacactattgatctc
attgtaagtgaagccataaagagtcagagaatggttcaaaatctactcagcattgcaaga
aaaatttgtgagcgtgttcaccgttcagctaaggcaaaagagaaattggcagagctgcaa
aaagcgcacgacttgcctgaaaatcagctagtccaagatatcccttccaagtggaataca
tctttttacatgcttgaacgtttagttgaacagaagaaagcaatcgatgagttgtctata
gagtgcaacttcagggaactgatcagttgtgatcagtgggaagtgatgcagtctgtgtgc
catgctttaaaaccatttgaggttgtctgcagggagatgagcacccgaacagctacactt
ggacaagttattccattgattcacattctaaacagaaagatagatatgttgtttgatgaa
accatgggtatagacaacatgctaaaatctttgaaagatggcatggtgagccgaatgtcc
tctttacttcacgacctgaggtacatctgggctactatgttggacccccgttataagacc
tcattatttacagaggaagaagcagaacagtataaacaggacctggtcaaagaactagat
ttattgtattctacctcaggagagagaaagcctattgtttccaatggttgtagcgaagtt
tctgctccatctaacagtgtttccagtagcaaggacaatctgtgggccctaatggatgat
atcaggaataaaataagagaggaaagaccaaagtcttcagaactgactgtacttgagtac
ttggaggaagaaatagtggatcaaagctgtgatcctcttgattactggaacctgaagaag
ttcctatggccagaccttgccaaaatagctattagatatgtcggatgccccccaagcatc
attccagcagagacactattcagtacagctagcaagagctgtagcctgaatcaaacaagg
tcaatgctagagaatatagaaagacggatctttttaaaagtaaaccttcccctaatatat
tttcagtattga
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