Polyodon spathula (Mississippi paddlefish): 121319756
Help
Entry
121319756 CDS
T07273
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like isoform X1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121319756
09133 Signaling molecules and interaction
04519 Cadherin signaling
121319756
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121319756
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121319756
04515 Cell adhesion molecules [BR:
pspa04515
]
121319756
Peptidases and inhibitors [BR:
pspa01002
]
Mixed peptidases
Family P2
121319756
G protein-coupled receptors [BR:
pspa04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
121319756
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121319756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Ig_CLSTN
Cadherin_FAT4_N
Laminin_G_1
EGF
Ig_Cad99C_N
hEGF
EGF_TEN
EGF_laminin
RET_CLD1
Dicty_CAR
Fibulin_C
Peptidase_M27_Wo
Frizzled
Motif
Other DBs
NCBI-GeneID:
121319756
NCBI-ProteinID:
XP_041113468
LinkDB
All DBs
Position
8:30838995..30933694
Genome browser
AA seq
3031 aa
AA seq
DB search
MELQAHWMLISFLLQLPKMGCFDLYLSDTSHAGAVLANVSLGPGWIYNIDRTLTPKYLIN
FLEIDAQEGVLKLSRRLDCARLVRNPAPLYFKISSTRSENFILTHFNAFVHGQDCFIKYK
RKSSKGKPDIYINYLSKLEATSCLSTGNLLMNVKEHLPVFVRHLEFLNSTCTETNSEIVV
KNGSLILKENRCLHSGERSEVDLLCTLTNLNDQISVRVKLRFMTTDSEGWLNDYSRGKMD
PWNTRKKRSVNAHSPQFKSSSYQVSIPENEPAGTPVITLSAVDPDDGEAGRLQYSMEALF
FSTSIDYFRIDPKTGSITTTQPLDRESKDTHVFKLTASDNGTPPRVGTSYLTVTISDNND
HTPTFELSEYKVILRENMEVGFEVTTIRATDGDAASNANMIYKIVNADGVNSAFEIDPTT
GLVKIRVRPDRETIAEYHLIVEANDQGKDPGPRSATATVHITIEDENDNYPQFSEKRYVV
QVPENVKENTKILQVEATDKDQGNNALVHYSIISGNIRGQFYIHSLTGIIDVINPLDYEN
IREYHLRIKAQDGGRPPLINGTGMVVVQVVDINDNAPMFVSTPFQSTVLENVPIGYSVIH
IQAIDADAGENSRLEYRLIDTPPNFPFTINNSTGWITVSVELDRETVDFYNFGIEARDHG
TPVMSTSASVSITVRDVNDNTPTFTEKVYYLRINEDAVVGSSVLTVIAIDRDVNSVVTYQ
ISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYVLTITASDGTRSDTAQVFINVTDAN
THRPVFQNFNNPVSIYEDKPIGTTVVVISAVDEDTGENARITYVMEDNIPQFKIDPDSGA
ITTQMELDYEDLASYTLAIIARDNGIPQKSDTTYVEIIVLDANDNAPQFLRDMYQGNVLE
DAPVYTSVLQISASDRDSWVNGRVSYTFQGGDDGEGDFMIEQSSGIIRNARRLDRENVPV
YNLKAYAVDKGVPPLKAPVEIQITVLDINDNPPVFEKDEFDIYVEENSSVGSIVARIKAT
DPDEGTNAQIMYQIVEGNIPEVFQLDIFNGDLTALTDLDYETKTEYIIVVQATSAPLVSR
ATVHIRLVDINDNDPVLQDFEIIFNNYITNKSNSFPSGVIGNVPAYDPDVSDKLHYTFLE
GNELNLLILNQDTGELKLSGLLDNNRPLEASMKVSVTDGIHQVTALCTLRVTIITDDMLT
NSITVRLENMSQEKFLSPLLSLFVEGVAAVLSTTKDGIFIFNIQNDTDVHTNILNVTFSA
LLPGGLRNQYFPSEDLQEQIYLNRTLLTMISTQRVLPFDDNICLREPCENYMKCISVLKF
DSSAPFITSNTVLFRPIHPINGLRCRCPPGFTGEYCETEIDLCYSSPCNNNGRCKSREGG
YSCECPEDFTGEHCEVNTRSGRCSPGVCKNGGTCINLLIGGFRCECPPGEYERPYCEMTT
RSFPPQSFVTFKGLRQRFHFTVSLMFATRERNALLLYNGRFNEKHDFIAVEIIDEQIQLT
FSAGEAVTTVAPLVPGGVSDGQWHSVQVHYYNKPNIGRLGIPHGPSGEKVAIVTVDDCDT
AVAVRFGNQIGNYSCAAQGTQTGPKKSLDLTGPLLLGGVPNLPEDFPVRNREFVGCMSNL
TIDSKAIDMASYIANNGTTAGCTMKNNFCSTIMCQNGGTCVNKWNTYSCECPLSYGGKNC
EQGMPSPQHFEGHGMVSWIMPDITISVPWYIGLMFRTRKSNGMLMQAKAGPSSKITILIS
SSNVQFELHRGFTQMANFKFTQIRVNDGDWHHLLIELKNVKDGKDMKLLALMSLDYGMYQ
GSVEIEKELPGMTLESLFLGGLLGDDGKIEQGFVGCMQGVRLGETATNVATLNMNQGKKI
RVQNGCDISDPCDSNTCPEHSHCSDDWKTHSCVCDPGYFGKDCVNVCQLNPCEHVSACVR
KPSSSHGYTCECGQNYYGQYCENKISQPCPRGWWGSSICGPCNCDTDKGFDPDCNKTSGE
CRCKANYYRPQGSDNCFPCDCFSLGAHTRTCDDETGQCQCKTSVIGRQCNRCDNPFAEVT
SNGCQVIYEGCPKSFEAGIWWPKTKFGRPAAMNCPKGSVGTAVRHCNEEKGWLPPELFNC
TTLTFSELKTMNEKMHRNETNMNGDKSKNIAELLHNATMHTDVFYGNDVKTAYQLISQVL
EYESKQQGFNLAATRDVEFNENIIKAGSAILDPRNKEHWEQIQRTEGGTAHLLKNYEDYA
NNMAQNMRKTYLKPFTIVTPNMIFALDFLDDSNPESAKIPCFEEIREEYPKDLKSTVKFP
GAIFRPQEVNPTVQPLEPSDSREVSEASAKRKRRQPEEANPHVVAVVMVYRTMGQLLPEQ
YDPDRRSLRLPNRPVINTPIVSTTVHSERGTLPTLLKEPITLHYNLLETEERTKPVCVFW
NHSIPIGGTGGWSSKGCELVFRNETHISCQCNHMTSFAVLMDISKREHGEVLPLKIVTYT
TISVSLVALLVTFVLLVIIRTLRSNLHSIHKNLVAALFFSELVFLIGINQTDNLFVCTVI
AILLHYFYMCTFAWMFVEGLHIYRMLTEVRNINHGHMRFYYAIGWGIPAVITGLAVGLDP
QGYGNPDFCWLSVHDTLIWSFAGPISLVVLVNIVIFVLAAKASCGRKNRTFEKTGVISSL
RTAFLLLLLISATWLLGLMAVNDDVMTFHYLFAIFSCLQGIVIFFFHCIFNKEVRKHLKN
TLTGKKSLPNESMTTRTSLLTRSLNCNNTYTDEPDMYRTTIGESTASLDSTVRSAKSHSS
YLAYMFREDSVQKPSISSSTARLGLTEGDSGKFHCNPTKTEDHDSDSDSELSADEHSSSY
ASSHSSDSEDDDTRLKPKWNPTTPKNNERQPLHSTPKADVVTNHVKPHLPKECTTASDSE
DPGGSDKLKVETKVSVELHQENKLNHIEEEPQEKDKLLKETAPQQNSNHQPEQRKGILKN
KIKYPPPLTDKNMTNRLREKLSDYNPPTIPSRTSSIGSNDGTRSAPGTGVLIKQPHRQQS
REQQNGVAMNVRVGIVNGDTSDSDGSNETSI
NT seq
9096 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcaagcgcactggatgttaatcagctttctattacaattgcctaagatggga
tgtttcgacctgtacctttcggatacttcacatgccggggctgtgttagcaaatgtatca
cttggaccgggatggatttataatattgatagaactttgacacccaaatacctgattaat
tttttggaaatagacgctcaagaaggagtgttaaaactttcacggcgattagactgtgcg
cgattggtaaggaatccagcgccgctttactttaagatcagttctacaagatctgaaaac
tttattttaacgcattttaatgcctttgtccacggacaagactgttttattaaatacaag
agaaagagttcaaaaggtaagccagatatatacatcaattatctttcaaaactggaagca
acttcttgcttgtccacaggtaacttgctgatgaatgtaaaagaacatttacctgttttt
gtacgtcatttagagtttttaaactccacgtgcactgaaacaaactctgaaatcgttgtt
aaaaatgggagcttaatactgaaggagaatcgttgcttgcattcgggggaaaggagcgag
gtggatttactttgtaccctaactaacctaaatgaccagatctctgtccgtgtgaaatta
cggtttatgacaacagactccgagggttggttaaatgattattcacgggggaaaatggat
ccatggaatacgcggaaaaaaagaagcgtgaacgcccacagtccccagtttaagtcctcc
agctatcaggtgtctattcctgagaatgaaccagctgggaccccagtaataactctgagt
gccgttgatccagatgacggggaggctggtaggcttcagtattccatggaggcattattt
ttttctacatcgattgattactttcggatagaccccaaaacagggagcatcactaccacc
cagcctttagacagggagagcaaggacacccatgtattcaagctgactgcttctgacaat
ggcacacctccgagagtgggaacatcctatctcacagtcaccatcagcgacaacaacgac
cacactcccacctttgagctatctgaatacaaagtgatcttaagagaaaacatggaagta
ggctttgaggtgacgacgatcagggccacagatggagatgcggcctccaatgctaacatg
atttacaagattgtaaatgcggatggggtaaattcagcttttgaaatagatccaacaacc
gggcttgtaaaaataagggtgcgcccagatagagaaactatagcagagtaccacttaata
gtggaggccaatgatcaaggcaaggaccctggccctagaagtgccacagcaactgtgcac
atcacaatagaagatgaaaatgataactacccacagttcagtgagaaaaggtatgtggtc
caggtacctgaaaacgtcaaggaaaacacgaaaatcctgcaagtggaagcaactgacaaa
gaccaaggcaataatgcgttagttcattacagcattataagtggcaacatcagaggccag
ttctatattcattctctcactggcatcattgatgtgatcaacccactggattatgagaat
atccgagagtatcatttgagaatcaaagcccaggatggcggcaggcctcctttgataaat
ggtactggaatggtagttgtgcaagtggtggacatcaatgataatgctccaatgtttgtc
agcacccctttccagtccactgtcttagaaaatgtcccaattggatattctgtgatacac
atacaggctattgatgcagacgctggggagaattctcgcttagaatacagattgatagat
accccacccaatttccctttcacaatcaacaacagtactggctggattacagtctctgtg
gaactagacagggaaacagttgacttttacaactttgggattgaagcacgggatcacggg
acacctgtcatgtcaacttctgccagtgttagcatcacagtgcgggatgtgaatgacaat
actcccaccttcactgagaaagtgtactaccttcggataaatgaagatgcagtagtggga
tctagtgtgctcactgtgatagcgattgacagagatgttaacagtgtggtaacataccag
atttcaagcggcaacaccaggaacagattcgcaattaccagtcagagtggcggaggcctt
ataacattagcattgcccttggattataaacaagagagacagtatgtcctcacaatcaca
gcctctgacggtactcgctcagacacagcccaggtctttatcaatgtcactgatgcgaat
acacacaggccagttttccaaaacttcaataatccagttagtatatatgaggacaaaccc
attggcacaactgtggtggtaatcagtgcagtggatgaagacacaggagaaaatgccagg
atcacttatgtcatggaagataacattcctcaatttaaaattgaccccgattcaggggca
attaccactcaaatggaacttgactatgaggacctggcttcctatacgttggcgattata
gcccgggataatggaattcctcagaagtcagatacaacatatgtggaaattattgtcctg
gatgccaatgacaatgcccctcaattcttaagagacatgtaccaaggcaatgtgttagaa
gatgcacctgtttacaccagtgtgctgcagatttcagcttccgacagggactcgtgggtt
aatggaagagtgagttatactttccaaggtggggatgatggggaaggggactttatgatt
gagcagtcttcaggcatcatcagaaatgcaagaaggttggacagagagaatgtgccagtt
tataacttgaaggcctatgctgtggacaagggggttccacctttgaaagcaccagtggag
atccagataactgtgctggatataaatgacaaccccccagtgtttgaaaaggatgaattt
gacatctatgttgaagaaaacagctcagtaggctcaatcgtggccaggatcaaagctacc
gacccagatgaaggaaccaatgctcagatcatgtaccagatagtggaaggaaatattcct
gaggtttttcagctcgacatttttaacggagaccttactgccttaacagatctagattat
gaaactaaaactgaatatatcattgtggttcaggctacttctgcaccgttggtcagccga
gccactgttcacattcgactcgtggatattaatgacaatgacccagtgctgcaggacttt
gagatcatttttaacaattacataaccaacaaatccaacagcttcccatctggagtaata
gggaatgttcctgcttatgacccagatgtgtcagataagcttcactatacctttttggaa
ggtaatgagttaaatctgttgattttgaaccaagacacaggagagttaaagctaagtgga
ctcttggataacaaccggcctttggaagccagcatgaaagtgtcggtcacagatggtatc
caccaggtgacagccctgtgcacactgcgagtgactatcatcacagatgacatgctgact
aacagcattacggtgcggctggagaacatgtcccaggagaagttcctctccccactcctc
tctctctttgtggaaggagtggctgctgtgttgtccaccaccaaagacggcatcttcatc
ttcaacatccagaatgacacagacgtgcacaccaacatactcaatgtcaccttctccgct
ctgctccctgggggcctccgcaaccagtacttcccttctgaggaccttcaagagcagatc
taccttaacaggaccctgctcaccatgatctccacccagcgcgtgcttcccttcgatgac
aacatctgcctgcgtgaaccctgtgagaactacatgaagtgcatctcggtgctcaaattc
gacagctcggctcccttcatcacctccaacactgtgctcttccgccccattcacccaatc
aacggcttgcgctgcagatgcccccccggatttacaggggagtactgcgagacagagata
gatctgtgctactccagcccttgcaataacaacggacggtgtaagagcagggagggaggc
tatagctgtgaatgccctgaggattttacaggagagcactgtgaagtgaacacacgctca
ggacgctgctctcctggtgtgtgtaagaatggagggacctgcatcaacctcctgataggt
gggttcaggtgtgagtgccctcctggagagtatgagcggccgtactgtgagatgaccacc
aggagcttccctcctcaatcctttgtcaccttcaagggactccggcagagatttcacttc
actgtttccctcatgttcgctaccagggaaaggaatgctttgctgctttacaatgggcgg
tttaatgaaaaacatgactttattgcggtagaaatcattgatgagcagatccagctgacg
ttctcagcaggtgaggcagtaacaacagtagctcccttagttccaggtggtgtcagtgat
gggcagtggcattcagtgcaggtgcactactataacaagcctaatattggaagattaggt
atccctcacgggccctctggagagaaggttgccatagttacagtggacgactgtgacact
gcagtggctgtgcgcttcggcaaccagattgggaactactcatgtgctgcccagggaact
caaactggtccaaaaaagtccttggatctgactggtcctctgctcctcgggggtgttcca
aacctgccggaagatttccctgtccggaaccgggaatttgtgggctgcatgagtaatctg
accattgacagcaaagctattgacatggccagctatatagccaacaatggcactacagca
ggctgcacaatgaaaaacaacttttgcagcacaattatgtgtcagaatggaggaacctgt
gtgaataagtggaacacctacagctgcgagtgccccctgagctatggagggaaaaactgt
gagcaaggaatgccctctccccagcactttgaaggccatggtatggtatcctggattatg
ccagatattaccatctctgttccttggtacattggcctgatgtttagaacaagaaaaagc
aatggaatgttaatgcaggccaaggctgggccgtcttccaagattaccatcctgataagt
agcagcaacgtgcagtttgaattgcaccgtgggttcacgcaaatggcaaatttcaaattt
acccaaataagggtaaatgatggggactggcaccatctactaattgaattgaaaaatgtt
aaggatggcaaggacatgaaattacttgctttgatgtctctggattatgggatgtaccag
ggaagtgtagaaattgagaaagagctgccaggaatgacgctggaaagcctatttttaggg
ggacttctaggggatgatgggaagatcgaacagggcttcgttggctgcatgcagggtgtg
aggttgggagagactgccacaaatgtagccactctgaatatgaaccagggcaagaaaatc
cgtgtgcagaatggctgtgatattagtgacccatgtgactcaaacacctgtcctgagcac
agtcactgcagcgatgactggaagacccactcctgtgtctgtgacccagggtactttggt
aaagactgtgtgaatgtatgccagttgaacccgtgcgaacatgtctcagcctgtgtccgt
aaacccagttcttcccatggatacacctgcgaatgtgggcagaattactacgggcaatac
tgtgaaaacaagatcagtcagccctgtcctcgaggctggtggggtagctctatctgcggc
ccatgtaattgtgacactgataaagggtttgaccctgactgcaataagacttcaggagag
tgcaggtgcaaggctaactactacaggccgcagggtagtgacaactgcttcccctgtgat
tgcttctctctgggagctcacacccggacctgtgatgacgagacgggacagtgccagtgt
aaaactagtgtcattggtcgacagtgcaaccgctgtgacaacccctttgctgaggtcact
agcaacggatgtcaagtgatttatgaaggctgccccaagtcgtttgaagctggaatttgg
tggcccaaaacgaagttcggccgtccagctgccatgaactgtcccaaaggatcagttggg
actgcagtccggcattgcaatgaagaaaagggctggcttcctcctgagctcttcaactgc
accactctcactttctctgagcttaaaacaatgaatgagaagatgcatcggaacgagact
aacatgaatggagacaagtccaagaatattgccgagttgctgcacaatgccaccatgcac
actgatgttttttatgggaatgatgtgaagactgcctaccagttaatatcgcaggtccta
gagtatgagagcaaacaacagggtttcaatctggctgcaacaagggatgttgaattcaat
gagaatattattaaagctggcagtgccatcttggacccaagaaacaaagagcactgggag
cagatccagcggacagagggaggcacggcccacctactgaaaaattatgaggattatgcc
aacaatatggcacagaacatgagaaagacctacctgaaaccgttcacaatagtgactcca
aatatgatttttgctcttgattttctggacgactccaacccagagagtgccaagattcct
tgttttgaagagatccgtgaggagtatcccaaagacctgaaatcaactgtcaagtttcct
ggtgccatctttagaccacaggaagtaaaccccacagtccagccattggagccgagtgat
tctcgtgaggtcagcgaggcctctgcaaagagaaagagaagacagccagaagaagctaac
cctcatgtggttgccgtggtgatggtgtacagaacaatgggacagcttctaccagagcaa
tacgatcctgacaggaggagcttaaggttaccgaaccggcctgtcattaacacaccgatc
gtgagcaccacagtccacagtgagagggggaccctgcccactctgctgaaggaacctatc
actttgcactacaaccttctagagacagaggagagaaccaagcctgtctgtgtgttctgg
aaccactcgattccgattggtgggactggaggctggtcctccaaaggctgtgagcttgtc
ttcagaaacgagacccatatcagctgccagtgcaatcacatgaccagctttgcagtgctc
atggatatctccaaacgagagcatggtgaggtgttgcccttgaagattgtcacttacacc
acaatctctgtatccctggtggccttgctggtgacatttgtactgctggtcatcatacgg
acactgcggtcaaaccttcacagcattcacaagaacttggtagcagctctcttcttctcc
gagctggtcttcctcattggaatcaaccagaccgataatctgtttgtctgcacggtgatt
gctatcctcctccactatttctacatgtgcacctttgcctggatgtttgtggaggggctg
cacatctaccggatgcttaccgaagttaggaacatcaatcacgggcacatgagattctac
tatgccattggctgggggatccctgccgtcataacaggtcttgcggtaggcctagaccca
cagggatatggcaatccagacttttgctggctctctgttcacgatactctcatttggagt
tttgcaggacccatttcactagtggtacttgtcaatatagtgatctttgtactagctgca
aaggcttcttgtggaagaaagaatagaacatttgaaaagaccggagtcatctctagcctg
cgcaccgctttcctcctgctcctactcatcagtgctacctggctgctcggtttgatggca
gtaaacgacgatgtgatgacctttcattatctctttgccatattcagttgtctacaggga
atagttattttcttcttccactgtatttttaacaaagaagtgagaaaacacttaaagaac
acactaactgggaagaaatctctacccaatgagtccatgacaacaagaacgtctctgtta
acacgatcactgaactgcaataacacgtacacagatgaaccagacatgtaccgcaccacc
attggagagtccaccgcttccctcgatagcactgtcaggtcagccaagagccacagcagc
tatcttgcttacatgttcagggaggactctgttcagaaaccaagtatttcatcaagcact
gcaagactggggctgactgaaggagactctggcaaattccactgcaacccaacaaagact
gaagaccatgactctgactcggacagcgagctctctgcggacgagcacagcagttcctat
gcctcctcgcattcatccgacagcgaagatgatgacactcggttgaagcccaagtggaat
ccaacaacacctaaaaacaacgagagacagccacttcacagcactccgaaagcagatgtt
gtgaccaatcacgtgaaaccgcacttgcccaaagaatgtacaacagccagtgacagcgag
gacccaggaggttcagacaagctcaaggtggaaaccaaggtcagcgttgaacttcaccaa
gaaaacaaactcaaccacatagaggaggaaccacaggagaaagacaagcttttgaaagag
actgcaccccagcaaaactccaaccatcagccagaacagagaaaaggtattctcaaaaac
aaaatcaagtacccaccgcctctaacagataagaatatgacaaaccggctcagagaaaag
ctttccgattacaatccacccaccattccgtcacggacatcttctatagggtccaatgat
gggacccgatcagccccaggcactggtgtacttataaaacagccacacaggcagcagtca
agagaacagcaaaatggagtggcaatgaatgttagagtggggattgtaaatggggacaca
tctgattcagatggaagcaatgaaacttcgatctga
DBGET
integrated database retrieval system
