Polyodon spathula (Mississippi paddlefish): 121319765
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Entry
121319765 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family D member 2-like
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
pspa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121319765
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121319765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121319765
Enzymes [BR:
pspa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
121319765
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
121319765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
Rad17
AAA_23
Adeno_IVa2
ORC-CDC6-like
SMC_N
AAA_27
RVP
ATPase_2
ARID
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
121319765
NCBI-ProteinID:
XP_041113502
LinkDB
All DBs
Position
8:complement(31220088..31243402)
Genome browser
AA seq
739 aa
AA seq
DB search
MSNILHAATKVKWNQSAAAKRAAFLVAAVYGVKTLYPVICKQINKRSQPGKSKACTSEEE
NGLLLQGSEIAPTRSPGVNAEFFNQILQLVKILFPKLVTKELGLLCLHSLALISRTFLSI
YVAGLDGKIVKTIVEKKPRSFVIKLIKWLLIAIPATFVNSVIRYLECKLALAFRTRLVDH
AYKTYFTNQTYYKVTNMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTL
IQTARSRGANASGPTLLAGLVVYATAKVLRACSPKFGKLVAEEAHRKGYLRYVHSRIIAN
AEEIAFYRGHKVEMKQLQKCYKALADQMHLILSKRLWYIMIEQFLMKYVWSSCGLVMVAV
PIITATGFADNELENGETQVLVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYT
ARVHNMFLVFDEVQKGVYKRSTVTQTAASDNTSAARPEMHINGPLEIKGHVIDVDNGIIC
ENVPIITPNGDVVASSLNFKVEEEMHLLITGPNGCGKSSLFRILSGLWPVYGGLLYKPPP
QHMFYIPQRPYMSIGTLRDQVIYPDSVEDMHGKGYRDLDLEIILDIVTLNQIVQREGGWD
AVMDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLS
ITHRPSLWKYHTHLLQFDGEGGWRFEQLDTATRLSLTEEKQRLESQLAGIPKMQHRLNEL
CKILGEDSVLKTTALEGED
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatattttgcatgcagccactaaagtgaaatggaaccagtcagctgcagcaaaa
cgtgctgcgtttcttgtcgctgctgtctatggagtgaaaacactgtacccagtaatttgc
aagcagatcaacaaaagatcacagccagggaaatcaaaagcctgcacatcagaggaagaa
aacggattattattacaaggatcagaaatagcaccaacaagatctccgggtgtaaatgcg
gagttttttaaccagattcttcaacttgtaaaaatcctctttccgaagctcgtcactaaa
gagctggggttgctttgtttgcattctttggctttaatctccagaacatttttgtctatt
tatgtggccggtttggacggtaaaatcgtgaagactatagttgaaaagaaaccgaggagc
ttcgtcatcaaattaattaaatggcttcttatagccataccggccacatttgtcaatagc
gtaatacgttatttggagtgcaagcttgctttggcctttcgcactcgccttgtggatcat
gcgtataaaacatatttcacaaatcagacatactataaagtcaccaatatggacgggaga
ctggcgaatccagaccagtccctcactgaggacatcatgatgttttcacaatcggttgca
catttgtattccaaccttaccaaaccaattttagacgtgatactaacctcttacaccctc
attcaaactgctagatcgaggggggccaacgcatcaggaccaaccctgttagccggacta
gtggtgtatgctacggcgaaggttctgagagcatgctccccgaaatttgggaaactggtg
gcagaggaggcacacaggaaaggttacttgcgttatgtgcattcccgtatcattgccaat
gctgaagagatcgcattttacagaggtcacaaggtagagatgaagcagctgcagaaatgt
tataaggcccttgctgatcagatgcacttaattttgtcaaagcgcctttggtacatcatg
atagagcagttcctgatgaagtatgtgtggagcagctgtggcttagtcatggtggcagta
cccataatcacagccactggttttgctgataacgagttagaaaatggagaaacacaggtc
ttggttagtgaaagaactgaagctttcactacagctcgtaaccttctggcctccggagct
gatgctattgagagaataatgtcttcctacaaagaggtcactgaacttgcgggctacact
gctcgagtccataatatgtttttggtcttcgatgaagtacaaaaaggagtttacaagaga
tccactgttactcagactgctgcatcagacaacacaagtgcagctaggcctgaaatgcac
atcaatggcccccttgaaatcaaaggacatgtcattgatgtggataacgggatcatatgt
gaaaatgtcccaatcatcactcccaatggtgatgtggttgcttccagcttaaattttaag
gtggaggaagagatgcatctcctaatcactggtcctaatggctgtggcaagagttcttta
ttcaggattttgagtggtctgtggcctgtctatggtgggcttctatacaagcctccgccc
cagcacatgttctatattccacaaagaccctacatgtcgataggaactttgcgggatcaa
gtcatataccctgactctgtagaagacatgcatggcaaaggctacagagacctggaccta
gaaatcattctggacattgtcactttgaatcagatagttcaaagagagggtggttgggat
gcagttatggattggaaggatgttttgtctggtggagagaaacagaggatgggcatggca
aggatgttttatcacagaccaaaatatgctttactagatgagtgtacaagtgctgtcagc
attgatgtggagggaaagatttttcaggctgcaaaggatgctggaatttctctgctttct
atcacacataggccgtccctctggaagtaccacactcacctcctgcagtttgatggtgaa
ggcggttggcgttttgaacagctggatacagcgactcgactctccctcacagaggagaaa
caaaggcttgagtcccagcttgccgggattcccaaaatgcagcatagactcaatgaactg
tgcaagatcctgggggaggattctgtcctcaagactactgctcttgagggtgaggattaa
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