Polyodon spathula (Mississippi paddlefish): 121319789
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Entry
121319789 CDS
T07273
Name
(RefSeq) cadherin-related family member 3-like isoform X1
KO
K16503
cadherin-related family member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121319789
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Cadherin related
121319789
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
121319789
NCBI-ProteinID:
XP_041113548
LinkDB
All DBs
Position
8:32615936..32650342
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AA seq
904 aa
AA seq
DB search
MDHNKFKIINLFLCICFWAIQGTSSAVTLSGLPNTVHVPENSPVGVVANFTVTTTGGATV
PMGSPMIINSNPLSTAFEIRKISSICEILITGNPILDFETAPNTFNLQIYVEDSKGDTDL
QVLTIVITDVDEPPVFLDNLENQAVSVYIAENSPQGIIYTVLAYDPENKSLQYSLQPTSY
PFFISAGKGSIISTKVFDYETDPQSYNLLVKVGDGTTPEINGNITVYIVNTNDNAPIFTM
KQTTFTIPEEQVPGTIVANVTAQDADDFNYVGKLIFSINPTDYFSIDPVTGIIQVAERID
RDAKPLRDNPLITVEVRVIDSPKGGKSSSMPITFNVTDINDNPPVCDPDTYRPQVEETAV
INTRITTITCTDIDVDPKNNQFIFTDLSCNACNQTFALNPAFAGNIVLTGSLDLEQPNNP
LEYTLTVVAEDITAPFYKDTAYVYVIVLPVNENPPVFYPAIYNFSVSELNGQGTMIGVVN
ATDKDIPFTGITYSIVAGGSSLGYSNIFWIDPNTGSIQLMTEPDYETTSKYVLTIKAVDN
DPKDPKTATAVVTVNILEANNEKPMCTPNYYTLTIPTDLSPGTNIQRFQLTCTDRESPPT
AFRYTINSGNINNHFAFSPTAGSNITRLILAEPFDYSGGLDKQWNYKLVVFITDDNQLSN
GIVETGTVTININVVIAGLTTVSTTTPPSITYIHIAKNVYATTAWYVPFVITLGAMLLLG
FLGYLLYHLAKFLSTKDLSCCTPKPDKYKEPLIQNTNKAKKEVVMELTKVNTVFDGEAVD
PVTGKVYEFNTKSGARRWKDTQILKDPQPIKIESSELVIPVLPSSINEGKGRIGTANGQK
TNSNGVKAEQKRAEKKNAFGPDPKSLLQNPAGQSTEGLSPLPTPKKKQEGEPKPILIKGD
LSEV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaataaatttaaaattataaacctgtttttatgtatctgtttttgggcaata
caaggcacgagtagtgctgttacattaagcggtttgccaaacacagtacatgtgccagaa
aacagtcctgttggggtggtggccaattttacagtaactactacagggggagccacagtt
cccatgggttctcccatgattataaactcaaatcctctcagcacagcctttgagatcagg
aaaataagttcaatatgtgagattctgatcactgggaatcctatactggatttcgaaaca
gcaccaaatacatttaatttgcagatatatgtggaagactcaaagggagacactgacctt
caagtacttactatagtgataacagatgtggatgagccccctgtgtttctggacaatttg
gaaaatcaagctgtatcagtttacatcgctgagaattcaccacaaggtatcatttataca
gttctagcatacgaccctgaaaataaatcactccagtattcattgcaaccaacaagttac
ccattttttattagcgctggaaaaggatccattatttcaaccaaagtttttgattatgag
acagacccccaaagttacaatttactggtcaaagtaggagatggaacaaccccagaaatt
aatggaaatataactgtttacattgtaaatacaaatgacaacgcgcctatttttaccatg
aagcagacaacatttaccattccagaagagcaggttccaggaacaattgttgctaacgta
acagctcaagatgcagatgactttaattatgtaggcaaactcatcttcagtataaacccc
acagattactttagcattgacccagtgacaggtatcattcaagtggcagagcggatagat
agagatgccaagccccttcgagacaatccactgataactgtagaagtgagggttatagac
agtccaaaagggggtaaatcaagttccatgccaataacattcaacgttactgatatcaac
gacaatccccctgtttgtgatccagatacctacaggcctcaagttgaagagacagcagtt
attaatacaaggattacaacaataacatgcactgatattgatgtcgacccaaaaaataat
cagttcatatttactgacctgtcttgtaatgcgtgtaatcagacatttgccctgaaccca
gcatttgcaggaaatattgtgttaacaggaagtctagaccttgaacaacctaataaccca
cttgaatacaccttgactgtagtggctgaagatataacagctccgttttataaagataca
gcttatgtttatgtgatagtccttccggtaaatgaaaatcctccagtgttctacccagca
atttataatttcagtgtttctgaacttaatggacaagggacaatgattggagttgtgaat
gcgactgacaaagatattccctttactggaataacctactcaatagtagcaggtggaagc
agtcttggttacagcaacatattttggatcgatccaaatacaggatcaatacagcttatg
acagaaccagactatgaaactacgtcaaagtatgttctcaccattaaggctgtggacaac
gatcctaaagatcctaaaacagcaactgctgtagtgacagtaaatattcttgaagcaaac
aatgaaaaaccaatgtgcacaccaaattattatacattgactattccaactgacctcagt
ccaggcactaacattcagaggttccaactcacctgcacagatcgagagtccccacctaca
gccttccgttacaccattaattcaggtaacataaacaatcactttgctttttcaccaacg
gcgggctcaaatatcacaaggcttattctggcagaaccgtttgattactctggcggcctg
gacaaacaatggaattataaacttgttgtatttataacggatgataaccaactatctaat
ggtattgtagagactggaacagttacaataaatataaatgtagtgatcgcaggcctgact
acagtttcaaccactacacctcctagtatcacatatatccatattgctaaaaatgtgtat
gctacaactgcatggtatgtcccattcgtaattaccctgggcgcaatgcttctccttgga
tttctggggtacctactctatcacctggcaaaatttctgtcaacaaaagacctcagctgc
tgcacaccaaaacctgataaatacaaggagcctctgattcaaaatacaaataaagccaag
aaagaagtcgttatggaattgacaaaggttaacactgtctttgatggagaagcagttgat
ccagtcacagggaaagtttatgagttcaatacaaagtctggagctcgccgctggaaagac
acccagatactcaaggaccctcagccaatcaaaatagagagcagtgagcttgtgattcca
gtgctgccctccagtattaacgaaggcaaaggtaggatcgggacagcaaacggacagaaa
accaacagtaacggtgtcaaggcagaacagaagagagctgaaaagaagaatgcatttgga
cctgaccctaagagcttgcttcagaacccagcagggcagtccactgaagggttgtcacca
ttaccaacgccaaagaagaaacaggaaggagaaccaaaacccattctgataaagggggat
ctgtcagaagtctga
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