Polyodon spathula (Mississippi paddlefish): 121319830
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Entry
121319830 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 44-like
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121319830
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121319830
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121319830
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121319830
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121319830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
121319830
NCBI-ProteinID:
XP_041113621
LinkDB
All DBs
Position
8:complement(33903384..33915668)
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AA seq
692 aa
AA seq
DB search
MDKCKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHAIKHFQE
KKHPVALEVNELYVFCYLCDDYVLNDNATGDLKLLRSTLSAIKSQNYECTTRSGRTLRSM
ASEDISAGSVQELLWDEDRMFTALWHRRRSLMGRVFRSWFELTEGGKRRTEEERLREEAE
IRRTKTRERRQELKRRLKEELESTPPRKSYRLKEQSQTSTPTMNVRGVLPKTFSRIPVPP
QQQAVRRKVSTAIHKQRKICTGEKKTTTSTSLKAGKLKSGDSPIKRRPTVTPGVTGLRNL
GNTCYMNSILQVLSHLHIFRECFLQLDLNQALELLASAANGSAHKPSSPILKRRNLSAGL
SGGASRTRSMELIQPKEPSSKHISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAF
RGYAQQDAQEFLCELLDKVQRELETTGTVQPAHMPASQRKLIKQVLNVINTIFHGQLLSQ
VTCLACDNKSNTVEPFWDLSLEFPERYHCYGKETASQYPCLLTEMLAKFTETEALEGKIY
ACDQCNSKRRRFSSKPVILLEAQKQLMVHKLPQVLRLHLKRFRWSGRNHREKIGVHVSFD
QILNMEPYCCRDSTGTLRPDSFIYDLSAVVMHHGKGFGSGHYTSYCYNTEGGFWVHCNDS
KLNICTVEEVCKAQAYILFYTQRVSQEKGPSL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggataaatgtaaacatgttggacggctacgacttgcccaggaccactcgattctgaac
ccgcagaaatggcactgtgtagactgtaacaccacagagtcggtgtgggcctgcctcagc
tgctcacacgtggcctgtggacgctacattgaggaacatgcgatcaagcactttcaggaa
aagaagcaccccgtggcgctagaggtgaatgagctgtacgttttctgctacttgtgtgac
gactatgtgctgaatgacaatgccacgggagacctcaagttgctacgcagcacgctaagt
gccatcaagagccagaactatgagtgcaccactcgcagcggccgaactctacgttccatg
gccagtgaagacatctctgcaggcagtgtgcaggagctgctgtgggatgaggaccgtatg
ttcacagcgctctggcaccggagacgctccctaatgggccgtgtcttccgctcttggttc
gagctgacagaaggaggcaagcggcggacagaggaggagagactcagggaagaggcagag
ataaggaggacaaagacccgggagaggaggcaggagctgaagcgtcggctgaaggaggag
ctggaaagcacccctccgaggaagagctaccgcctgaaggagcagagccaaacaagcact
cccacaatgaatgtaaggggagttttgcccaagacatttagcaggattccagtgccacca
cagcaacaagcagtaagaagaaaagtatcaacagcaattcataagcaaaggaagatatgc
acaggggaaaaaaaaacaaccacatccacctcgctcaaagcaggcaagttaaagtctgga
gactctcccatcaaacggaggcccacagtaacccctggtgtgacaggcctgcgcaatttg
ggcaacacctgctatatgaactctatcctgcaagtgctgagccacctgcacatcttccgc
gagtgcttcctgcagcttgacctcaaccaagccctggagctgcttgccagcgctgccaat
ggcagtgctcacaaaccctcatcccccatcttaaagaggaggaacttatcagcaggcctg
agcggaggagcctcacgtacgaggagcatggagcttatccagcccaaggagcccagctcc
aaacacatttccctgtgccatgaactgcacacccttttccaggtgatgtggtcagggaag
tgggctctggtgtcccccttcgccatgctccactcggtgtggaggcttatcccagccttt
aggggctatgcccaacaggatgctcaggagttcctctgtgagcttttggataaagtgcag
cgggaactggagaccacgggcactgtacagcctgcccacatgcctgcctcacagaggaag
cttatcaaacaggtcctgaatgttatcaacactatatttcatgggcagcttctcagtcag
gttacctgccttgcctgtgacaataaatccaataccgtagagccattctgggacttgtca
ctggaattccctgaaaggtaccactgctacggaaaagaaactgcctcgcagtatccctgc
ctgctgacagaaatgttagcaaagttcacagagacagaagccttggaagggaagatatat
gcatgtgatcagtgcaacagtaagcgcaggagattttcttctaaaccagtcatccttttg
gaagctcagaaacagctcatggtccacaaactgcctcaggtcttgagactgcaccttaaa
cgttttaggtggtctggtcgcaatcatcgtgagaaaattggagtccatgtcagctttgat
cagatactgaacatggagccctactgctgtagggattccacagggaccctcaggccagac
tctttcatatatgacttgtctgctgtagtgatgcatcatggaaagggatttggctcggga
cactacacttcgtattgctataatacagaaggagggttctgggtgcattgtaatgattcc
aagttaaacatctgcactgtggaggaagtgtgtaaggcacaggcctacatactcttttat
acccagcgtgtttctcaggagaaaggaccatctctttaa
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