Polyodon spathula (Mississippi paddlefish): 121319848
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Entry
121319848 CDS
T07273
Name
(RefSeq) protein transport protein Sec61 subunit alpha
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03060
Protein export
pspa04141
Protein processing in endoplasmic reticulum
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
121319848
04141 Protein processing in endoplasmic reticulum
121319848
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121319848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319848
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pspa02044
]
121319848
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
121319848
Secretion system [BR:
pspa02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121319848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
121319848
NCBI-ProteinID:
XP_041113644
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Position
8:complement(34346858..34354348)
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCVVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPAEMGAGICLIIIIQLFVAGMIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRADKVRALREAFYRQNLP
NFLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN
LYVISQMLSVRFSGNFLVSLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPIH
VIIYIIFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGALSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGGLFF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggaattaagtttttagaagttataaagcccttctgtgttgttctacctgaaatacag
aagcccgaaagaaagatccagtttagagagaaggtgctatggacggctataacacttttt
atattcttagtatgctgccagattccattatttggaattatgtcatcagattcggcagat
cctttctattggatgagagtcatcctggcttccaacaggggcaccctgatggaacttggt
atctctccaattgtaacatctggcctgatcatgcagctcctggctggtgctaaaatcatt
gaggttggagatacaccaaaagacagggctctatttaatggagctcagaaattgtttggt
atgattataactattggtcaggccattgtgtatgttatgactggaatgtatggcgatcct
gcagaaatgggggctggcatctgtctcataatcattattcagctgtttgttgctggcatg
attgtgctgctcttagatgaattgcttcagaaaggatatggtttgggatctgggatttca
ctcttcattgctacaaacatttgtgaaaccattgtctggaaagcttttagccccaccaca
atcaacactgggcgaggaacggaatttgagggtgcagtgattgccctcttccatctgctg
gctactagagctgataaagtccgtgctcttcgtgaggctttttatcgccagaatctgccc
aactttttgaacctgattgctacagtgtttgtctttgctgtagtcatatacttccaggga
ttccgggtagatcttccaatcaagtctgcccgttaccgaggacagtacagcagctacccc
attaagcttttctacacttccaacattccgattatccttcagtctgccctggtctccaac
ctttacgtcatctctcagatgctctcagttagatttagtgggaacttcctggtcagcctg
cttgggcagtgggcggacgtaagcggaggtggacctgctcgttcctatccagttgggggt
ctgtgttactacctctctcctccagagtcaatgggtgccatatttgaagatcccattcat
gttataatttacattattttcatgctgggatcatgcgctttcttctccaagacatggatt
gatgtttctggttcatctgcaaaggatgttgctaaacagctgaaggaacaacagatggta
atgagaggccacagagaaacgtccatggtccatgagctcaataggtatattcctacagcg
gctgcttttggtggtctgtgcattggagccctgtcagttatggccgacttcttgggagcc
attggatcaggcactgggattttgcttgctgttaccatcatctaccagtattttgaaatc
tttgtcaaggaacaggctgaagttggagggatggggggcttatttttctaa
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